Korean Journal of Poultry Science (한국가금학회지)

The Korean Society of Poultry Science (한국가금학회)
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Association of SNPs in ODC and PRDM16 with Body Weight Traits in Korean Native Chicken

  • Cahyadi, Muhammad (Department of Animal Science and Biotechnology, Chungnam National University) ;
  • Seo, Dongwon (Department of Animal Science and Biotechnology, Chungnam National University) ;
  • Jin, Shil (Department of Animal Science and Biotechnology, Chungnam National University) ;
  • Choi, Nuri (Department of Animal Science and Biotechnology, Chungnam National University) ;
  • Park, Hee-Bok (Institute of Agriculture and Life Science, Gyeongsang National University) ;
  • Heo, Kang Nyeong (Poultry Science Division, National Institute of Animal Science, RDA) ;
  • Kang, Bo Seok (Poultry Science Division, National Institute of Animal Science, RDA) ;
  • Jo, Cheorun (Department of Animal Science and Biotechnology, Chungnam National University) ;
  • Lee, Jun Heon (Department of Animal Science and Biotechnology, Chungnam National University)
  • Received : 2013.06.12
  • Accepted : 2013.06.13
  • Published : 2013.06.30
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Abstract

Both ODC and PRDM16 genes were known to be associated with body weight traits in chicken. These two genes were located on GGA3 and GGA21, respectively, where the QTLs of body weights are located. Therefore, the objectives of this study were to identify the SNPs in these two genes and their associations with body weight traits in Korean native chicken. Fluidigm Dynamic Array integrated fluidic circuits (IFCs) assay was used to genotype 7 SNPs consisting g.-353C>T, g.2136A>G, g.2524T>C, g.3607C>T SNPs of the ODC gene, and g.182216C>T, g.182290A>T, g.182491A>T SNPs of the PRDM16 gene. Statistical analysis showed that g.2136A>G SNP of the ODC was associated with body weight at 20 weeks of age and slaughter weight, and g.3607C>T SNP of the ODC was associated with body weight at 2 weeks of age. Association between g.182216C>T SNP of the PRDM16 and body weight at 12 weeks of age has also been revealed. In addition, g.182491A>T SNP of PRDM16 has significant correlation with body weight (BW) at 8 weeks, BW at 10 weeks and BW at 14 weeks of age. These results suggested that both ODC and PRDM16 could be strong candidate genes for body weight traits in Korean native chicken.

Keywords

References

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