Journal of Plant Biotechnology

The Korean Society of Plant Biotechnology (한국식물생명공학회)
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SNP discovery and applications in Brassica napus

  • Hayward, Alice (Centre for Integrative Legume Research and School of Agriculture and Food Sciences, University of Queensland) ;
  • Mason, Annaliese S. (Centre for Integrative Legume Research and School of Agriculture and Food Sciences, University of Queensland) ;
  • Dalton-Morgan, Jessica (Centre for Integrative Legume Research and School of Agriculture and Food Sciences, University of Queensland) ;
  • Zander, Manuel (Centre for Integrative Legume Research and School of Agriculture and Food Sciences, University of Queensland) ;
  • Edwards, David (Australian Centre for Plant Functional Genomics, School of Agriculture and Food Sciences, University of Queensland) ;
  • Batley, Jacqueline (Centre for Integrative Legume Research and School of Agriculture and Food Sciences, University of Queensland)
  • Received : 2012.03.05
  • Accepted : 2012.03.15
  • Published : 2012.03.31
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Abstract

This review summarises the biology, discovery and applications of single nucleotide polymorphisms in complex polyploid crop genomes, with a focus on the important oilseed crop $Brassica$ $napus$. $Brassica$ $napus$ is an allotetraploid species, and along with soybean and oil palm is one of the top three most important oilseed crops globally. Current efforts are well underway to $de$ $novo$ assemble the $B.$ $napus$ genome, following the release of the related $B.$ $rapa$ 'A' genome last year. The next generation of genome sequencing, SNP discovery and analysis pipelines, and the associated challenges for this work in $B.$ $napus$, will be addressed. The biological applications of SNP technology for both evolutionary and molecular geneticists as well as plant breeders and industry are far-reaching, and will be invaluable to our understanding and advancement of the $Brassica$ crop species.

Keywords

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