Journal of Microbiology and Biotechnology

  • 제22권9호
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  • Pages.1208-1213
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  • 2012
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  • 1017-7825(pISSN)
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  • 1738-8872(eISSN)
한국미생물·생명공학회 (The Korean Society for Microbiology and Biotechnology)
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Draft Genome Database Construction from Four Strains (NIES-298, FCY-26, -27, and -28) of the Cyanobacterium Microcystis aeruginosa

  • Rhee, Jae-Sung (Department of Molecular and Environmental Bioscience, Graduate School, Hanyang University) ;
  • Choi, Beom-Soon (Department of Molecular and Environmental Bioscience, Graduate School, Hanyang University) ;
  • Han, Jeonghoon (Department of Molecular and Environmental Bioscience, Graduate School, Hanyang University) ;
  • Hwang, Soon-Jin (Department of Environmental Science, Konkuk University) ;
  • Choi, Ik-Young (National Instrumentation Center for Environmental Management, College of Agriculture and Life Sciences, Seoul National University) ;
  • Lee, Jae-Seong (Department of Molecular and Environmental Bioscience, Graduate School, Hanyang University)
  • 투고 : 2011.12.19
  • 심사 : 2012.05.03
  • 발행 : 2012.09.28
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초록

Microcystis aeruginosa is a cyanobacterium that can form harmful algal blooms (HABs) producing toxic secondary metabolites. We provide here draft genome information of four strains of this freshwater cyanobacterium that was obtained by the Next Generation Sequencing approach to provide a better understanding of molecular mechanisms at the physiological and ecological levels. After gene assembly, genes of each strain were identified and annotated, and a genome database and G-browser of M. aeruginosa were subsequently constructed. Such genome information resources will enable us to obtain useful information for molecular ecological studies with a better understanding of modulating mechanisms of environmental factors associated with blooming.

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참고문헌

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피인용 문헌

  1. Identification of the Full 46 Cytochrome P450 (CYP) Complement and Modulation of CYP Expression in Response to Water-Accommodated Fractions of Crude Oil in the Cyclopoid Copepod Paracyclopina nana vol.49, pp.11, 2015, https://doi.org/10.1021/acs.est.5b01244
  2. Improved Draft Genome Sequence of Microcystis aeruginosa NIES-298, a Microcystin-Producing Cyanobacterium from Lake Kasumigaura, Japan vol.6, pp.5, 2018, https://doi.org/10.1128/genomea.01551-17
  3. Distribution and conservation of known secondary metabolite biosynthesis gene clusters in the genomes of geographically diverse Microcystis aeruginosa strains vol.71, pp.5, 2012, https://doi.org/10.1071/mf18406