DOI QR코드

DOI QR Code

Genetic Analysis on the Bacterial Blight Resistance Gene from a Wild Relative, Oryza minuta

야생벼 Oryza minuta에서 유래한 수원506호의 흰잎마름병 저항성유전자에 대한 고찰

  • Received : 2011.02.17
  • Published : 2011.06.30

Abstract

Bacterial blight (BB), cuased by the vascular pathogen Xanthomonas oryzae pv. oryzae, is one of the major threats in rice fields worldwide. In Korea, two resistance genes against BB, Xa1 and Xa3 had been intensively used for developing high quality japonica rice cultivars. Those traditional resistance sources have being rapidly ified by the adopting of BB pathogen through mutations of the corresponding avr-genes, such as K3a exhibiting high compatibility to both Xa1 and Xa3. To expanding genetic resource against BB in Korea, the Suweon506, an introgression line between a Korean japonica cultivar, Hwaseong and a wild relative, Oryza minuta, was be subjected for genetic analysis owing to the BB resistance. Through association analyses between the pathotyping and genotyping results for each $F_2$ progenies, derived from a cross between Suweon506 and a Tongil type cultivar, Milyang23, a major resistant dominant gene is localized on the subterminal region of rice chromosome 4, where at least three BB resistancde genes, Xa1, Xa2, and Xa22, were reported previously.

벼 흰잎마름병은 세계적으로 벼 재배치에서 가장 문제시되는 병해충의 하나이다. 우리나라의 경우 상습발생지를 중심으로 Xa1과 Xa3 이 저항성 유전자로 활용되었으나, 소수의 저항원이 집중적으로 활용됨으로 인해 최근 이병화가 급속히 진행되고 있다. 특히 최근 Xa1과 Xa3 모두를 침해하는 새로운 균계 K3a가 확인됨에 따라 새로운 저항성 유전자의 동정 및 활용의 중요성이 높아가고 있다. 국내육성 자포니카품종 화성벼와 야생벼 O. minuta 간의 종간교잡을 통해 확립된 수원506호의 흰잎마름병에 대한 유전분석을 실시하였다. 수원506호와 통일계 품종인 밀양23호간의 교잡을 통해 확보한 F2 개체들을 활용하여 흰잎마름균주 HB3011 의 접종에 따른 병반장의 변이와 유전자지도 작성에 사용된 SSR 마커의 유전자형간의 연관성분석을 수행하였다. 수원506호의 흰잎마름병 저항성을 지배하며 우성유전자로 작용하는 주동유전인자가 염색체 4변 하단에서 SSR 마커 RM255 에 의해 표지 되었는데, 해당 염색체영역은 Xa1과 Xa2 및 Xa22 등이 보고되었던 영역과 매우 유사할 것으로 추정되었다.

Keywords

References

  1. Brar DS, Khush GS. 1997. Alien introgression in rice. Plant Mol. Biol. 35: 35-47. https://doi.org/10.1023/A:1005825519998
  2. Choi JE, Kang HK, Lee DG. 1996. Classification of Korean isolates of Xanthomonas oryzae pv. oryzae on the basis of their virulence to Korean, Japanese and IRRI differential varieties. Korean J. Plant Pathol. 12: 202-208.
  3. He Q, Li D, Zhu Y, Tan M, Zhang D, Lin X. 2006. Fine mapping of Xa2, a bacterial resistance gene in rice. Molecular Breeding 17: 1-6. https://doi.org/10.1007/s11032-005-8698-2
  4. Huang N, Angeles ER, Domingo J, Magpantay G, Singh S, Zhang G, Kumaravadivel N, Bennett J, Khush GS. 1997. Pyramiding of bacterial blight resistance genes in rice: marker-aided selection using RFLP and PCR. Theor. Appl. Genet. 95: 313-320. https://doi.org/10.1007/s001220050565
  5. Jena KK, Jeung JU, Lee JH, Choi HC, Brar DS. 2006. High-resolution mapping of a new brown planthopper (BPH) resistance gene, Bph18(t), and marker-assisted selection for BPH resistance in rice (Oryza sativa L.) Theor. Appl. Genet. 112: 288-297. https://doi.org/10.1007/s00122-005-0127-8
  6. Jeung JU, Hwang HG, Moon HP, Jena KK. 2005. Fingerprinting template japonica and tropical indica rice genotypes by comparative analysis of DNA markers. Euphytica 146: 239-251.
  7. Jeung JU, Heu SG, Shin MS, Vera Cruz CM, Jena KK. 2006. Dynamics of Xanthomonas oryzae pv. oryzae populations in Korea and their relationship to known bacterial blight resistance genes. Phytopathology 96: 867-875. https://doi.org/10.1094/PHYTO-96-0867
  8. Jeung JU, Kim BR, Cho YC, Han SS, Moo HP, Lee YT, Jena KK. 2007. A novel gene, Pi40(t), linked to the DNA markers derived from NBS-LRR motifs confers broad spectrum of blast resistance in rice. Theor. Appl. Genet. 115: 1163-1177. https://doi.org/10.1007/s00122-007-0642-x
  9. Kang KH, Seo JP, Jeon YH, Jeung JU, Lee YT. 2007. Development of elite lines with disease and insect resistance through wide hybridization in rice. Treat. of Crop Res. 8: 89-104.
  10. Kauffman HE, Reddy APY, Hsieh SPY, Merca SD. 1973. An improved technique for evaluating resistance of rice varieties to Xanthomonas oryzae. Plant Dis. Rep. 57: 537-541.
  11. Kim KY, Shin MS, Kim WJ, Ko JC, Baek MG, Ha KY, Kim BK Ko JK, Noh GI, Park HS, Noh TH, Noh JH, Cheong JI, Kim YD, Mo YJ, Kim CK. 2008. A new medium-maturing, "Gangbaek" with reistance to bacterial blight. Korean J. Breed. Sci. 40: 443-446.
  12. Lee DK, Seo JH, Choi JE, Park KH, Bae SH. 1986. Pathotypes of Xanthomonas campestris pv. oryzae in Homan District, Korea. Korean J. Plant Pathol. 2: 102-106.
  13. Lee SW, Choi SH, Han SS, Lee DG, Lee BY. 1999. Distribution of Xanthomonas oryzae pv. oryzae strain virulent to Xa21 in Korea. Phyopathology 89: 928-933. https://doi.org/10.1094/PHYTO.1999.89.10.928
  14. McCouch SR, Teytelman L, Xu Y, Lobos KB, Clare K, Walton M, Fu B, Maghirang R, Li Z, Xing Y, Zhang Q, Kono I, Yano M, Fjellstrom R, DeClerck G, Schneider D, Cartinhour S, Ware D, Stein L. 2002. Development and Mapping of 2240 New SSR Markers for Rice (Oryza sativa L.). DNA Res. 9: 257-279. https://doi.org/10.1093/dnares/9.6.257
  15. Murray M, Thompson W. 1980. Rapid isolation of high molecular weight plant DNA. Nucl. Acid Res. 8: 4321. https://doi.org/10.1093/nar/8.19.4321
  16. Noh TH, Lee DK, Kang MH, Shin MS, and Na SY. 2003. Identification of new race of Xanthomonas oryzae pv. oryzae in Korea. Phytopathology 93: S66.
  17. Noh TH, Lee DK, Park JC, Shim HK, Choi MY, Kang MH, Kim JD. 2007. Effects of bacterial leaf blight occurrence on rice yield and grain quality in different rice growth stage. Res. Plant Dis. 13: 20-23. https://doi.org/10.5423/RPD.2007.13.1.020
  18. Rahman ML, Chu SH, Choi MS, Qiao YL, Jiang W, Piao R, Khanam S. Cho YI, Jeung JU, Jena KK, Koh HJ. 2007. Identification of QTLs for some agronomic traits in rice using an introgression line from Oryza minuta. Mol. Cells. 24: 16-26.
  19. SAS Institute. 2000. SAS Language and Procedure: Usage, Release & 01. SAS Institute, Cary, NC, USA.
  20. Sanchez AC, Brar DS, Huang N, Li Z, Khush GS. 2000. Sequence tagged site marker-assisted selection for three bacterial blight resistance genes in rice. Crop Sci. 40: 792-797. https://doi.org/10.2135/cropsci2000.403792x
  21. Shin HT, Shin MS, Cho SY. 1998. Breeding of near-isogenic lines resistance to bacterial blight in rice. Korean J. Breed. 30: 185-191.
  22. Shin MS, Noh TH, Lee JK, Shin HT, Lee YM. 2000. Breeding of Japonica near-isogenic lines for resistance to bacterial blight in rice. Korean J. Breed. 32: 291-295.
  23. Singh S, Sidhu JS, Huang N, Vikal Y, Li Z, Brar DS, Dhaliwal HS, Khush GS. 2001. Pyramiding three bacterial blight resistance genes (xa5, xa13 and Xa21) using marker-assisted selection into indica rice cultivar PR106. Theor. Appl. Genet. 102: 1011-1015. https://doi.org/10.1007/s001220000495
  24. Yang D, Sanchez A, Khush GS, Zhu Y, Huang N. 1998. Construction of a BAC contig containing the xa5 locus in rice. Theor. Appl. Genet. 97: 1120-1124. https://doi.org/10.1007/s001220050999
  25. Yoshimura S, Yamanouchi U, Katayose Y, Toki S, Wang ZX, Kono I, Kuruta N, Yano M, Iwata N, Sasaki T. 1998. Expression of Xa1, a bacterial blight resistance gene in rice, is induced by bacterial inoculation. Proc. Natl. Acad. Sci. USA. 95: 1663-1668. https://doi.org/10.1073/pnas.95.4.1663
  26. Xiang Y, Cao Y, Xu C, Li X, Wang S. 2006. Xa3, conferring resistance for rice bacterial blight and encoding a receptorkinase- like protein, is the same as Xa26. Theor. Appl. Genet. 113: 1347-1355. https://doi.org/10.1007/s00122-006-0388-x

Cited by

  1. Genetic Analysis on Floury Endosperm Characteristics of 'Namil(SA)-flo1', a Japonica Rice Mutant Line vol.58, pp.3, 2013, https://doi.org/10.7740/kjcs.2013.58.3.283
  2. Agronomic and Genetic Evaluation on a Dull Mutant Line Derived from the Sodium Azide Treated ‘Namil’, a Non-Glutinous Japonica Rice vol.60, pp.4, 2015, https://doi.org/10.7740/kjcs.2015.60.4.448