서울지역 급성위장관염 환자 및 지하수에서 분리한 A형 로타바이러스의 유전자형

Genotype of Group A Rotavirus Isolated in Acute Gastroenteritis Patients and Groundwater in Seoul, Korea

  • 김은정 (서울시보건환경연구원) ;
  • 김무상 (서울시보건환경연구원) ;
  • 채영주 (서울시보건환경연구원) ;
  • 천두성 (질병관리본부 간염 폴리오팀)
  • Kim, Eun-Jeung (Virus Team, Seoul Metropolitan Government Research Institute of Public Health and Environment) ;
  • Kim, Moo-Sang (Virus Team, Seoul Metropolitan Government Research Institute of Public Health and Environment) ;
  • Chae, Young-Zoo (Virus Team, Seoul Metropolitan Government Research Institute of Public Health and Environment) ;
  • Cheon, Doo-Sung (Center for Infectious Diseases, Korea National Institute of Health, Division of Enteric and Hepatitis Viruses)
  • 투고 : 2011.10.14
  • 심사 : 2011.11.18
  • 발행 : 2011.12.31

초록

2009년부터 2010년까지 서울지역에서 산발적으로 발생한 급성위장관염 환자에 대하여 효소면역측정법(ELISA)을 이용하여 로타바이러스를 검출하였다. 총 1,916건 중 로타바이러스는 354건(18.4%)이 검출되었다. RT-PCR을 이용하여 유전자형 분석을 실시한 결과 P6G[4] (35%), P8G[3] (28%), P8G[1] (24%), P4G[2] (10%), P8G[9] (3%)로 나타났다. 서울지역 지하수 70지점을 대상으로 효소면역측정법을 이용하여 로타바이러스를 조사한 결과 2 지점에서 양성으로 검출되었으며, RT-PCR을 이용하여 유전자형 분석을 실시한 결과 P8G[3]로 나타났다. 이러한 연구결과는 서울지역 로타바이러스 질환의 예방을 위한 기초자료로 활용될 것으로 기대된다.

Fecal specimens from acute gastroenteritis in Seoul from 2009 to 2010 were collected and then tested for the presence of Group A Rotavirus by ELISA. Among a total of 1,916 samples investigated, 354 samples (18.4%) were positive. The predominant genotypes of positive samples were confirmed as P6G[4] (35%), P8G[3] (28%), P8G[1] (24%), P4G[2] (10%), P8G[9] (3%), respectively. Among a total of 70 ground water samples investigated, 2 samples (2.8%) were positive. The genotypes of positive samples were confirmed as P8G[3] (100%). By this molecular investigation, genotypic distribution associated with rotavirus will be used for control and prevention of rotavirus related diseases.

키워드

참고문헌

  1. APHA. 1995. Standard methods for the examination of water and wastewater, 19th ed. American Public Health Association, Washington, D.C., USA.
  2. Fout, G.S., B.C. Martinson, M.W. Moyer, and D.R. Dahling. 2003. A multiplex reverse transcription-PCR method for detection of human enteric viruses in groundwater. Appl. Environ. Microbiol. 69, 3158-3164. https://doi.org/10.1128/AEM.69.6.3158-3164.2003
  3. Gentsch, J.R., R.I. Glass, P. Woods, V. Gouvea, M. Gorziglia, J. Flores, B.K. Das, and M.K. Bhan. 1992. Identification of group A rotavirus gene 4 types by polymerase chain reaction. J. Clin. Microbiol. 30, 1365-1373.
  4. Gouvea, V., R.I. Glass, P. Woods, K. Taniguchi, H.F. Clark, B. Forrester, and Y.Z. Fang. 1990. Polymerase chain reaction amplification and typing of rotavirus mucleic acid from stool specimens. J. Clin. Microbiol. 28, 276-282.
  5. Han, T.H., C.H. Kim, J.Y. Chang, S.H. Park, and E.S. Hwang. 2010. Genetic characterization of rotavirus in children in South Korea from 2007 to 2009. Arch. Virol. 155, 1663-1673. https://doi.org/10.1007/s00705-010-0752-7
  6. He, X.Q., L. Cheng, D.Y. Zhang, W. Li, X.M. Xie, M. Ma, and Z.J. Wang. 2009. First molecular detection of group A rotaviruses in drinking water sources in Beijing, China. Bull. Environ. Contam. Toxicol. 83, 120-124. https://doi.org/10.1007/s00128-009-9708-6
  7. Huh, J.W., W.H. Kim, M.H. Yoon, and Y.H. Lim. 2009. Genotypic distribution of rotavirus strains causing severe gastroenteritis in Gyeonggi province, South Korea, from 2003 to 2005. Arch. Virol. 154, 167-170. https://doi.org/10.1007/s00705-008-0275-7
  8. Jang, J.M., C.S. Son, S.E. Lee, and M.J. Kim. 2005. Epidemiologic characteristics and infection control measures for an outbreak of rotavirus infection in the Neonatal Unit. Infec. Chemother. 37, 311-318.
  9. Jens, V., T.W. Monica, L. Rainer, B. Ibrahim, S. Sibel, K. Aynur, U. Alexandra, M. Farouk, and P. Herbert. 2009. Detection of adenoviruses and rotaviruses in drinking water sources used in rural areas of benin, west Africa. Appl. Environ. Microbiol. 75, 2798-2801. https://doi.org/10.1128/AEM.01807-08
  10. Kang, S.Y., K.V. Nagaraja, and J.A. Newman. 1986. Primary isolated and identification of avian rotaviruses from turkeys exhibiting signs of clinical enteritis in a continous MA104 cell line. Avian. Dis. 30, 494-499. https://doi.org/10.2307/1590412
  11. Kapikian, A.Z., J. Flores, K. Midthun, M. Gorgilia, K. Nisikawa, R.M. Chanock, L. Potash, and I. Perez-Schael. 1990. Strategies for the development of a rotavirus vaccine against infantile diarrhea with an update on clinical trials of ratavirus vaccines. Adv. Exp. Med. Biol. 257, 67.
  12. Kim, K., J. Yang, S. Joo, Y. Cho, R.I. Glass, and Y. Cho. 1990. Importance of rotavirus and adenovirus type 40 and 41 acute gastroenteritis in Korea children. J. Clin. Microbiol. 28, 2279-2284.
  13. Lee, S.Y., S.K. Hong, S.G. Lee, C.I. Suh, S.W. Park, J.H. Lee, J.H. Kim, D.S. Kim, H.M. Kim, Y.T. Jang, and et al. 2009. Human rotavirus genotypes in hospitalized children, South Korea. Vaccine 20, 97-101.
  14. Lodder, W.J., H.H. van den Berg, S.A. Rutjes, and A.M. de Roda Husman. 2010. Presence of enteric viruses in source waters for drinking water production in The Netherlands. Appl. Environ. Microbiol. 76, 5965-5971. https://doi.org/10.1128/AEM.00245-10
  15. Prasad, B.V., G.J. Wang, J.P.M. Clerx, and W. Chiu. 1988. Three dimensional structure of rotavirus. J. Mol. Biol. 199, 269-275. https://doi.org/10.1016/0022-2836(88)90313-0
  16. Sato, K., Y. India, T. Shinozaki, R. Fujii, and M. Matumoto. 1981. Isolation of human rotavirus in cell cultures. Arch. Virol. 69, 155-160. https://doi.org/10.1007/BF01315159
  17. Taniguchi, K. and S. Urasawa. 1995. Diversity in rotavirus genomes. Virology 6, 123-131.
  18. USEPA. 2001. USEPA manual of methods for virology. Concentration and processing of waterborne viruses by positive charge 1 MDS cartridge filters and organic flocculation. EPA/600/4-84/013(N14). Office of Reserch and Development, U.S. Environmental protection Agency, Washington, D.C., USA.
  19. van Zyl, W.B., N.A. Page, W.O. Grabow, A.D. Steele, and M.B. Taylor. Molecular epidemiology of group A rotaviruses in water sources and selected raw vegetables in southern Africa. Appl. Environ. Microbiol. 72, 4554-4560.