DOI QR코드

DOI QR Code

Purification of Caudal-Related Homeodomain Transcription Factor and Its Binding Characterization

  • Jeong, Mi-Suk (Department of Molecular Biology, College of Natural Sciences, Pusan National University) ;
  • Hwang, Eun-Young (Department of Molecular Biology, College of Natural Sciences, Pusan National University) ;
  • Kim, Hyun-Tae (Department of Molecular Biology, College of Natural Sciences, Pusan National University) ;
  • Yoo, Mi-Ae (Department of Molecular Biology, College of Natural Sciences, Pusan National University) ;
  • Jang, Se-Bok (Department of Molecular Biology, College of Natural Sciences, Pusan National University)
  • Published : 2009.12.31

Abstract

Human CDX2 is known as a caudal-related homeodomain transcription factor that is expressed in the intestinal epithelium and is important in differentiation and maintenance of the intestinal epithelial cells. The caudal-related homeobox proteins bind DNA according to a helix-turn-helix structure, thereby increasing the structural stability of DNA. A cancer-tumor suppressor role for Cdx2 has been shown by a decrease in the level of the expression of Cdx2 in colorectal cancer, but the mechanism of transcriptional regulation has not been examined at the molecular level. We developed a large-scale system for expression of the recombinant, novel CDX2, in Escherichia coli. A highly purified and soluble CDX2 protein was obtained in E. coli strain BL21(DE3)RIL and a hexahistidine fusion system using Ni-NTA affinity column, anion exchange, and gel filtration chromatographies. The identity and secondary structure of the purified CDX2 protein were confirmed by MALDI-TOF MS, Western blot, and a circular dichroism analyses. In addition, we studied the DNA-binding activity of recombinant CDX2 by ELISA experiment and isolated human CDX2-binding proteins derived from rat cells by an immobilized GST-fusion method. Three CDX2-binding proteins were found in the gastric tissue, and those proteins were identified to the homeobox protein Hox-D8, LIM homeobox protein 6, and SMC1L1 protein.

Keywords

References

  1. Banerjee-Basu, S. and A. D. Baxevanis. 2001. Molecular evolution of the homeodomain family of transcription factors. Nucleic Acids Res. 29: 3258-3269 https://doi.org/10.1093/nar/29.15.3258
  2. Blumberg, B., C. V. Wright, E. M. De Robertis, and K. W. Cho. 1991. Organizer-specific homeobox genes in Xenopus laevis embryos. Science 253: 194-196 https://doi.org/10.1126/science.1677215
  3. Chawengsaksophak, K., R. James, V. E. Hammond, F. Kontgen, and F. Beck. 1997. Homeosis and intestinal tumours in Cdx2 mutant mice. Nature 386: 84-87 https://doi.org/10.1038/386084a0
  4. Dorsett, D., J. C. Eissenberg, Z. Misulovin, A. Martens, B. Redding, and K. McKim. 2005. Effects of sister chromatid cohesion proteins on cut gene expression during wing development in Drosophila. Development 132: 4743-4753 https://doi.org/10.1242/dev.02064
  5. Duprey, P., K. Chowdhury, G. R. Dressler, R. Balling, D. Simon, J. L. Guenet, and P. Gruss. 1998. A mouse gene homologous to the Drosophila gene caudal is expressed in epithelial cells from the embryonic intestine. Genes Dev. 2: 1647-1654 https://doi.org/10.1101/gad.2.12a.1647
  6. Frumkin, A., Z. Rangini, A. Ben-Yehuda, Y. Greunbaum, and A. Fainsod. 1991. A chicken caudal homologue, Chox-cad, is expressed in the epiblast with posterior localization and in the early endodermal lineage. Development 112: 207-219
  7. Gamer, L. W. and C. V. Wright. 1993. Murine Cdx-4 bears striking similarities to the Drosophila caudal gene in its homeodomain sequence and early expression pattern. Mech. Dev. 43: 71-81 https://doi.org/10.1016/0925-4773(93)90024-R
  8. German, M. S., J. Wang, R. B. Chadwick, and W. J. Rutter. 1992. Synergistic activation of the insulin gene by a LIM-homeo domain protein and a basic helix-loop-helix protein: Building a functional insulin minienhancer complex. Genes Dev. 6: 2165-2176 https://doi.org/10.1101/gad.6.11.2165
  9. Hu, Y., J. Kazenwadel, and R. James. 1993. Isolation and characterization of the murine homeobox gene Cdx-1. J. Biol. Chem. 268: 27214-27225
  10. James, R., T. Erler, and J. Kazenwadel. 1994. Structure of the murine homeobox gene Cdx2: Expression in embryonic and adult intestinal epithelium. J. Biol. Chem. 269: 15229-15237
  11. Jensen, O. N., A. V. Podtelejnikov, and M. Mann. 1997. Identification of the components of simple protein mixtures by high-accuracy peptide mass mapping and database searching. Anal. Chem. 69: 4741-4750 https://doi.org/10.1021/ac970896z
  12. Lee, S. Y., B. P. Nagy, A. R. Brooks, D. M. Wang, B. Paulweber, and B. Levy-Wilson. 1996. Members of the caudal family of homeodomain proteins repress transcription from the human apolipoprotein B promoter in intestinal cells. J. Biol. Chem. 271: 707-718 https://doi.org/10.1074/jbc.271.2.707
  13. Lorentz, O., I. Duluc, A. D. Arcangelis, P. Simon-Assmann, M. Kedinger, and J. N. Freund. 1997. Key role of the Cdx2 homeobox gene in extracellular matrix-mediated intestinal cell differentiation. J. Cell Biol. 139: 1553-1565 https://doi.org/10.1083/jcb.139.6.1553
  14. Lorentz, O., A. Cadoret, I. Duluc, J. Capeau, C. Gespach, G. Cherqui, and J. N. Freund. 1999. Downregulation of the colon tumour-suppressor homeobox gene Cdx2 by oncogenic ras. Oncogene 18: 87-92 https://doi.org/10.1038/sj.onc.1202280
  15. Lynch, J., E. R. Suh, D. G. Silberg, S. Rulyak, N. Blanchard, and P. G. Traber. 2000. The caudal-related homeodomain protein Cdx1 inhibits proliferation of intestinal epithelial cells by downstream of D-type cyclins. J. Biol. Chem. 275: 4499-4506 https://doi.org/10.1074/jbc.275.6.4499
  16. Margalit, Y., S. Yarus, E. Shapira, Y. Gruenbaum, and A. Fainsod. 1993. Isolation and characterization of target sequences of the chicken CdxA homeobox gene. Nucleic Acids Res. 21: 4915-4922 https://doi.org/10.1093/nar/21.21.4915
  17. Meissner, A. and R. Jaenisch. 2005. Generation of nuclear transfer-derived pluripotent ES cells from cloned Cdx2-deficient blastocysts. Nature 439: 212-215 https://doi.org/10.1038/nature04257
  18. Meyer, B. I. and P. Gruss. 1993. Mouse Cdx1 expression duringgastrulation. Development 117: 191-203
  19. Musio, A., C. Montagna, T. Mariani, M. Tilenni, M. L. Focarelli, L. Brait, et al. 2005. SMC1 involvement in fragile site expression. Hum. Mol. Genet. 14: 525-533 https://doi.org/10.1093/hmg/ddi049
  20. Oh, E., J. Park, M. Cho, W. Lee, Y. H. Choi, and M. Yoo. 2002. The Caudal-related homeodomain protein CDX1 activates proliferating cell nuclear antigen expression in hepatocellular and colorectal carcinoma cells. Int. J. Oncol. 20: 23-29
  21. Perkins, D. N., D. J. Pappin, D. M. Creasy, and J. S. Cottrell. 1999. Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis 20: 3551-3567 https://doi.org/10.1002/(SICI)1522-2683(19991201)20:18<3551::AID-ELPS3551>3.0.CO;2-2
  22. Pfaff, S. L., M. Mendelsohn, C. L. Stewart, T. Edlund, and T. M. Jessell. 1996. Requirement for LIM homeobox gene Isl1 in motor neuron generation reveals a motor neuron-dependent step in interneuron differentiation. Cell 84: 309-320 https://doi.org/10.1016/S0092-8674(00)80985-X
  23. Pinto, M., S. Robine-Leon, M. D. Appay, M. Kedinger, N. Triadou, E. Dussaulx, et al. 1983. Enterocyte-like differentiation and polarization of the human colon carcinoma cell line Caco2 in culture. Biol. Cell 47: 323-330
  24. Rozek, L. S., S. M. Lipkin, E. R. Fearon, S. Hanash, T. J. Giordano, J. K. Greenson, et al. 2005. CDX2 polymorphisms, RNA expression, and risk of colorectal cancer. Cancer Res. 65: 5488-5492 https://doi.org/10.1158/0008-5472.CAN-04-3645
  25. Suh, E. and P. G. Traber. 1996. An intestine-specific homeobox gene regulates proliferation and differentiation. Mol. Cell Biol. 16: 619-625
  26. Troelsen, J. T., C. Michelmore, N. Spodsberg, A. M. Jensen, O. Noren, and H. Sjostrom. 1997. Regulation of lactase-phlorizin hydrolase gene expression by the caudal-related homeodomain protein Cdx-2. Biochem. J. 322: 833-838
  27. Wang, H.-F. and F.-C. Liu. 2001. Developmental restriction of the LIM homeodomain transcription factor Islet-1 expression to cholinergic neurons in the rat striatum. Neuroscience 103: 999-1016 https://doi.org/10.1016/S0306-4522(00)00590-X
  28. Wicking, C., L. A. Simms, T. Evans, M. Walsh, K. Chawengsaksophak, F. Beck, et al. 1998. CDX2, a human homologue of Drosophila caudal, is mutated in both alleles in a replication error positive colorectal cancer. Oncogene 17: 657-659 https://doi.org/10.1038/sj.onc.1201971

Cited by

  1. Binding Properties and Structural Predictions of Homeodomain Proteins CDX1/2 and HOXD8 vol.32, pp.7, 2009, https://doi.org/10.5012/bkcs.2011.32.7.2325
  2. Transcript Analysis Reveals a Specific HOX Signature Associated with Positional Identity of Human Endothelial Cells vol.9, pp.3, 2014, https://doi.org/10.1371/journal.pone.0091334
  3. Characterization of BRPMBL, the Bleomycin Resistance Protein Associated with the Carbapenemase NDM vol.61, pp.3, 2017, https://doi.org/10.1128/aac.02413-16
  4. Gene expression signature for detection of gastric cancer in peripheral blood vol.15, pp.6, 2009, https://doi.org/10.3892/ol.2018.8577