References
- Baylin, S. B. and J. G. Herman. 2000. DNA hypermethylation in tumorigenesis: Epigenetics joins genetics. Trends Genet. 16: 168-174 https://doi.org/10.1016/S0168-9525(99)01971-X
- Baylin, S. B., M. Esteller, M. R. Rountree, K. E. Bachman, K. Schuebel, and J. G. Herman. 2001. Aberrant patterns of DNA methylation, chromatin formation and gene expression in cancer. Hum. Mol. Genet. 10: 687-692 https://doi.org/10.1093/hmg/10.7.687
- Bird, A. 1992. The essentials of DNA methylation. Cell 70: 5-8 https://doi.org/10.1016/0092-8674(92)90526-I
- Boel, P., C. Wildmann, M. L. Sensi, R. Brasseur, J. Renauld, P. Coulie, et al. 1995. BAGE: A new gene encoding an antigen recognized on human melanomas by cytolytic T lymphocytes. Immunity 2: 167-175 https://doi.org/10.1016/S1074-7613(95)80053-0
- Boon, T. and P. Van der Bruggen. 1996. Human tumor antigens recognized by T lymphocytes. J. Exp. Med. 183: 725-729 https://doi.org/10.1084/jem.183.3.725
- Boon, T., P. G. Coulie, B. J. Van den Eynde, and P. van der Bruggen. 2006. Human T cell responses against melanoma. Annu. Rev. Immunol. 24: 175-208 https://doi.org/10.1146/annurev.immunol.24.021605.090733
- Chang, E. J., H. J. Kim, J. Ha, H. J. Kim, J. Ryu, K. H. Park, U. H. Kim, Z. H. Lee, H. M. Kim, D. E. Fisher, and H. H. Kim. 2007. Hyaluronan inhibits osteoclast differentiation via Toll-like receptor 4. J. Cell Sci. 120: 166-176 https://doi.org/10.1242/jcs.03310
- Chen, Y. T. 1997. A testicular antigen aberrantly expressed in human cancers detected by autologous antibody screening. Proc. Natl. Acad. Sci. USA 94: 1914-1918
- Chen, Y. T., A. O. Gure, S. Tsang, E. Stockert, E. Jager, A. Knuth, and L. J. Old. 1998. Identification of multiple cancer/testis antigens by allogenic antibody screening of a melanoma cell line library. Proc. Natl. Acad. Sci. USA 95: 6919-6923
- Chen, Y. T., M. Scanlan, U. Sahin, O. Tureci, A. O. Gure, S. Tsang, et al. 1997. A testicular antigen aberrantly expressed in human cancers detected by autologous antibody screening. Proc. Natl. Acad. Sci. USA 94: 1914-1918.
- Cho, B., H. Lee, S. Jeong, Y. J. Bang, H. J. Lee, K. S. Hwang, H. Y. Kim, Y. S. Lee, G. H. Kang, and D. I. Jeoung. 2003. Promoter hypomethylation of a novel cancer/testis antigen gene CAGE is correlated with its aberrant expression and is seen in premalignant stage of gastric carcinoma. Biochem. Biophys. Res. Commun. 307: 52-63 https://doi.org/10.1016/S0006-291X(03)01121-5
- Cho, B., Y. Lim, D. Y. Lee, S. Y. Park, H. Lee, W. H. Kim, H. Yang, Y. J. Bang, and D. I. Jeoung. 2002. Identification and characterization of a novel cancer/testis antigen gene CAGE. Biochem. Biophys. Res. Commun. 292: 715-726 https://doi.org/10.1006/bbrc.2002.6701
- Cook, A. C., A. F. Chambers, E. A. Turley, and A. B. Tuck. 2006. Osteopontin induction of hyaluronan synthase 2 expression promotes breast cancer malignancy. J. Biol. Chem. 281: 24381-24389 https://doi.org/10.1074/jbc.M602694200
- Diala, E. S., M. S. C. Cheah, D. Rotwich, and R. M. Hoffman. 1983. Extent of DNA methylation in tumor cells. J. Natl. Cancer Inst. 71: 755-764
- Disis, M. L., E. Calenoff, G. McLaughlin, A. E. Murphy, W. Chen, B. Groner, M. Jeschke, N. Lydon, E. McGlynn, R. B. Livingston, R. Moe, and M. A. Cheever. 1994. Existent T-cell and antibody immunity to Her/neu protein in patients with breast cancer. Cancer Res. 54: 16-20
- Eden, S. and H. Cedar. 1994. Role of DNA methylation in the regulation of transcription. Curr. Opin. Genet. Dev. 4: 255-259 https://doi.org/10.1016/S0959-437X(05)80052-8
- Eichmuller, S., D. Usener, R. Dummer, A. Stein, D. Thiel, and D. Schadendorf. 2001. Serological detection of cutaneous T-cell lymphoma-associated antigens. Proc. Natl. Acad. Sci. USA 98: 629-634
- Esteller, M., O. G. Corn, S. B. Baylin, and J. G. Herman. 2001. A gene hypermethylation profile of human cancers. Cancer Res. 61: 3225-3229
- Feinberg, A. P. and B. Vogelstein. 1983. Hypomethylation distinguishes genes of some human cancers from their normal counterparts. Nature 301: 89-92 https://doi.org/10.1038/301089a0
- Feinberg, A. P., C. W. Gehrke, K. C. Kuo, and M. Ehrlich. 1988. Reduced genomic 5-methylcytosine in human colonic neoplasia. Cancer Res. 48: 1159-1161
- Fuks, F., W. A. Burgers, A. Brehm, L. Hughes-Davies, and T. Kouzarides. 2000. DNA methyltransferase Dnmt1 associates with histone deacetylase activity. Nat. Genet. 24: 88-91 https://doi.org/10.1038/71750
- Gomes, J. A., R. Amankwah, A. Powell-Richards, and H. S. Dua. 2004. Sodium hyaluronate (hyaluronic acid) promotes migration of human corneal epithelial cells in vitro. Br. J. Ophthalmol. 88: 821-825 https://doi.org/10.1136/bjo.2003.027573
- Grunwald, C., M. Koslowski, T. Arsiray, K. Dhaene, M. Praet, A. Victor, A. Morresi-Hauf, M. Lindner, B. Passlick, H. A. Lehr, S. C. Schafer, G. Seitz, C. Huber, U. Sahin, and O. Tureci. 2006. Expression of multiple epigenetically regulated cancer/germline genes in nonsmall cell lung cancer. Int. J. Cancer 118: 2522-2528 https://doi.org/10.1002/ijc.21669
- Gure, A. O., N. K. Altorki, E. Stockert, M. Scanlan, L. J. Old, and Y. T. Chen. 1998. Human lung cancer antigens recognized by autologous antibodies: Definition of a novel cDNA derived from the tumor suppressor gene locus on chromosome 3p21.3. Cancer Res. 58: 1034-1041
- Haroon, Z. A., J. M. Hettasch, T. S. Lai, M. W. Dewhirst, and C. S. Greenberg. 1999. Tissue transglutaminase is expressed, active, and directly involved in rat dermal wound healing and angiogenesis. FASEB J. 13: 1787-1795 https://doi.org/10.1096/fasebj.13.13.1787
- Hirling, H., M. Scheffner, T. Restle, and H. Stahl. 1989. RNA helicase activity associated with the human p68 protein. Nature 339: 562-564 https://doi.org/10.1038/339562a0
- Huang, S., K. D. Preuss, X. Xie, E. Regitz, and M. Pfreundschuh. 2002. Analysis of the antibody repertoire of lymphoma patients. Cancer Immunol. Immunother. 51: 655-662 https://doi.org/10.1007/s00262-002-0320-4
- Itoh, K., C. D. Platsoucas, and C. M. Balch. 1988. Autologous tumor-specific cytotoxic T lymphocytes in the infiltrate of human metastatic melanomas. Activation by interleukin 2 and autologous tumor cells, and involvement of the T cell receptor. J. Exp. Med. 168: 1419-1441 https://doi.org/10.1084/jem.168.4.1419
- Iwata, T., T. Fujia, Y. Matsuzaki, T. Okada, H. Mochimaru, N. Susumu, et al. 2005. Frequent immune responses to a cancer/testis antigen, CAGE, in patients with microsatellite instabilitypositive endometrial cancer. Clin. Cancer Res. 119: 3949-3957
- Jager, D., M. Unkelbach, C. Frei, F. Bert, M. J. Scanlan, E. Jager, L. J. Old, Y. T. Chen, and A. Knuth. 2002. Identification of tumor-restricted antigens NY-BR-1, SCP-1, and a new cancer/testis-like antigen NW-BR-3 by serological screening of a testicular library with breast cancer serum. Cancer Immun. 2: 5
- Jager, E., Y. T. Chen, J. Drijfhout, J. Karbach, M. Ringhoffer, D. Jager, M. Arand, H. Wada, Y. Noguchi, E. Stoockert, L. J. Old, and A. Knuth. 1998. Simultaneous humoral and immune response against cancer-testis antigen NY-ESO-1: Definition of human histocompatibility leukocyte antigen (HLA-2)-A2-binding peptide epitopes. J. Exp. Med. 187: 265-270 https://doi.org/10.1084/jem.187.2.265
- Jones, P. L., G. J. Veenstra, P. A. Wade, D. Vermaak, S. U. Kass, N. Landsberger, J. Strouboulis, and A. P. Wolffe. 1998. Methylated DNA and MeCP2 recruit histone deacetylases to repress transcription. Nat. Genet. 19: 187-191 https://doi.org/10.1038/561
- Khong, H. T., J. C. Yang, S. L. Topalian, R. M. Sherry, S. A. Mavroukakis, et al. 2004. Immunization of HLA-A*0201 and/or HLA-DPbeta1*04 patients with metastatic melanoma using epitopes from the NY-ESO-1 antigen. J. Immunother. 27: 472-477 https://doi.org/10.1097/00002371-200411000-00007
- Kikuchi, R., H. Tsuda, Y. Kanai, T. Kasamatsu, K. Sengoku, S. Hirohashi, J. Inazawa, and I. Imoto. 2007. Promoter hypermethylation contributes to frequent inactivation of a putative conditional tumor suppressor gene connective tissue growth factor in ovarian cancer. Cancer Res. 67: 7095-7105 https://doi.org/10.1158/0008-5472.CAN-06-4567
- Kim, H. R., M. A. Wheeler, C. M. Wilson, J. Iida, D. Eng, M. A. Simpson, J. B. McCarthy, and K. M. Bullard. 2004. Hyaluronan facilitates invasion of colon carcinoma cells in vitro via interaction with CD44. Cancer Res. 64: 4569-4576 https://doi.org/10.1158/0008-5472.CAN-04-0202
- Kim, M. S., H. Y. Choi, Y. S. Choi, J. Kim, and Y. S. Kim. 2007. Optimized serological isolation of lung cancer-associated antigens from a yeast surface-expressed cDNA library. J. Microbiol. Biotechnol. 17: 993-1001
- Knoepfler, P. S. and R. N. Eisenman. 1999. Sin meets NuRD and other tails of repression. Cell 99: 447-450 https://doi.org/10.1016/S0092-8674(00)81531-7
- Kono, K., Y. Rongcun, J. Charo, F. Ichihara, E. Celis, A. Sette, et al. 1998. Identification of HER2/neu-derived peptide epitopes recognized by gastric cancer-specific cytotoxic T lymphocytes. Int. J. Cancer 78: 202-208 https://doi.org/10.1002/(SICI)1097-0215(19981005)78:2<202::AID-IJC14>3.0.CO;2-C
- Labrecque, S., N. Naor, D. Thomson, and G. Matlashweski. 1993. Analysis of the anti-p53 antibody response in cancer patients. Cancer Res. 53: 3468-3471
- Laird, P. W., L. Jackson-Grusby, A. Fazeli, S. L. Dickinson, W. E. Jung, E. Li, R. A. Weinberg, and R. Jaenisch. 1995. Suppression of intestinal neoplasia by DNA hypomethylation. Cell 81: 197-205 https://doi.org/10.1016/0092-8674(95)90329-1
- Laird, P. W. and R. Jaenisch. 1994. DNA methylation and cancer. Hum. Mol. Genet. 3: 1487-1495 https://doi.org/10.1093/hmg/3.suppl_1.1487
- Lee, S. B., I. H. Bae, Y. S. Bae, and H. D. Um. 2006. Link between mitochondria and NADPH oxidase 1 isozyme for the sustained production of reactive oxygen species and cell death. J. Biol. Chem. 281: 36228-36235 https://doi.org/10.1074/jbc.M606702200
- Lee, S. Y. and D. Jeoung. 2007. The reverse proteomics for identification of tumor antigens. J. Microbiol. Biotechnol. 17: 879-890
- Lee, S. Y., Y. Obata, M. Yoshida, E. Stockert, B. Williamson, A. A. Jungbluth, Y. T. Chen, L. J. Old, and M. J. Scanlan. 2003. Immunomic analysis of human sarcoma. Proc. Natl. Acad. Sci. USA 100: 2651-2656
- Li, E., C. Beard, A. C. Forster, T. H. Bestor, and R. Jaenisch. 1993. DNA methylation, genomic imprinting, and mammalian development. Cold Spring Harbor Symp. Quant. Biol. 58: 297-305
- Li, E., C. Beard, and R. Jaenisch. 1993. Role for DNA methylation in genome imprinting. Nature 366: 362-365 https://doi.org/10.1038/366362a0
- Linder, P., P. F. Lasko, M. Ashburner, P. Leroy, P. J. Nielsen, K. Nishi, J. Scgnier, and P. P. Slonimski. 1989. Birth of the D-E-AD box. Nature 337: 121-122 https://doi.org/10.1038/337121a0
- Livingston, P. O., E. J. Natoli, M. J. Calves, E. Stockert, H. F. Oettgen, and L. J. Old. 1987. Vaccines containing purified GM2 ganglioside elicit GM2 antibodies in melanoma patients. Proc. Natl. Acad. Sci. USA 84: 2911-2915
- Loriot, A., E. De Plaen, T. Boon, and C. De Smet. 2006. Transient down-regulation of DNMT1 methyltransferase leads to activation and stable hypomethylation of MAGE-A1 in melanoma cells. J. Biol. Chem. 281: 10118-10126 https://doi.org/10.1074/jbc.M510469200
- Lunyak, V. V., R. Burgess, G. G. Prefontaine, C. Nelson, S. H. Sze, J. Chenoweth, P. Schwartz, P. A. Pevzner, C. Glass, G. Mandel, and M. G. Rosenfeld. 2002. Corepressor-dependent silencing of chromosomal regions encoding neuronal genes. Science 98: 1747-1752
- Maa, M. C., J. C. Lee, Y. J. Chen, Y. J. Chen, Y. C. Lee, S. T. Wang, C. C. Huang, N. H. Chow, and T. H. Leu. 2007. Eps8 facilitates cellular growth and motility of colon cancer cells by increasing the expression and activity of focal adhesion kinase. J. Biol. Chem. 282: 19399-19409 https://doi.org/10.1074/jbc.M610280200
- Martelange, V., C. De Smet, E. De Plaen, C. Lurquin, and T. Boon. 2000. Identification on a human sarcoma of two new genes with tumor-specific expression. Cancer Res. 60: 3848-3855
- Miyahara, Y., H. Naota, L. Wang, A. Hiasa, M. Goto, M. Watanabe, S. Kitano, S. Okumura, T. Takemitsu, A. Yuta, Y. Majima, F. A. Lemonnier, T. Boon, and H. Shiku. 2005. Determination of cellularly processed HLA-A2402-restricted novel CTL epitopes derived from two cancer germ line genes, MAGE-A4 and SAGE. Clin. Cancer Res. 11: 5581-5589 https://doi.org/10.1158/1078-0432.CCR-04-2585
- Mummert, M. E., D. I. Mummert, L. Ellinger, and A. Takashima. 2003. Functional roles of hyaluronan in B16-F10 melanoma growth and experimental metastasis in mice. Mol. Cancer Ther. 2: 295-300
- Muul, L. M., P. J. Spiess, E. P. Director, and S. A. Rosenberg. 1987. Identification of specific cytolytic immune responses against autologous tumor in humans bearing malignant melanoma. J. Immunol. 138: 989-995
- Nan, X., H. H. Ng, C. A. Johnson, C. D. Laherty, B. M. Turner, R. N. Eisenman, and A. Bird. 1998. Transcriptional repression by the methyl-CpG-binding proteins MeCP2 involves a histone deacetylase complex. Nature 393: 386-389 https://doi.org/10.1038/30764
- Obata, Y., T. Takahashi, J. Sakamoto, H. Tamaki, S. Tominaga, N. Hamajima, et al. 2000. SEREX analysis of gastric cancer antigens. Cancer Chemother. Pharmacol. 46: S37-S42 https://doi.org/10.1007/PL00014048
- Oehlrich, N., G. Devitt, M. Linnebacher, Y. Schwitalle, S. Grosskinski, S. Stevanovic, and M. Zöller. 2005. Generation of RAGE-1 and MAGE-9 peptide-specific cytotoxic T-lymphocyte lines for transfer in patients with renal cell carcinoma. Int. J. Cancer 117: 256-264 https://doi.org/10.1002/ijc.21200
- Okada, T., M. Akada, T. Fujita, T. Iwata, Y. Goto, K. Kido, et al. 2006. A novel cancer testis antigen that is frequently expressed in pancreatic, lung, and endometrial cancers. Clin. Cancer Res. 12: 191-197 https://doi.org/10.1158/1078-0432.CCR-05-1206
- Ottaviani, S., Y. Zhang, T. Boon, and P. van der Bruggen. 2005. A MAGE-1 antigenic peptide recognized by human cytolytic T lymphocytes on HLA-A2 tumor cells. Cancer Immunol. Immunother. 54: 1214-1220 https://doi.org/10.1007/s00262-005-0705-2
- Quan, G., J. Y. Choi, D. S. Lee, and S. C. Lee. 2005. TGFbeta1 up-regulates transglutaminase two and fibronectin in dermal fibroblasts: A possible mechanism for the stabilization of tissue inflammation. Arch. Dermatol. Res. 297: 84-90 https://doi.org/10.1007/s00403-005-0582-8
- Rosenberg, S. A., J. C. Yang, D. J. Schwartzentruber, P. Hwu, F. M. Marincola, S. L. Topalian, et al. 1998. Immunologic and therapeutic evaluation of a synthetic peptide vaccine for the treatment of patients with metastatic melanoma. Nat. Med. 4: 321-327 https://doi.org/10.1038/nm0398-321
- Sahin, U., O. Türeci, H. Schmitt, B. Cochlovius, T. Johannes, R. Schmits, et al. 1995. Human neoplasms elicit multiple specific immune responses in the autologous host. Proc. Natl. Acad. Sci. USA 92: 11810-11813
- Scanlan, M. J., A. O. Gure, A. A. Jungbluth, L. J. Old, and Y. T. Chen. 2002. Cancer/testis antigens: An expanding family of targets for cancer immunotherapy. Immunol. Rev. 188: 22-32 https://doi.org/10.1034/j.1600-065X.2002.18803.x
- Shim, E., H. Shim, J. Bae, H. Lee, and D. Jeoung. 2006. CAGE displays oncogenic potential and induces cytolytic T lymphocyte activity. Biotechnol. Lett. 28: 515-522 https://doi.org/10.1007/s10529-006-0008-5
- Shim, H., H. Lee, and D. Jeoung. 2006. Cancer/testis antigen cancer-associated gene (CAGE) promotes motility of cancer cells through activation of focal adhesion kinase (FAK). Biotechnol. Lett. 28: 2057-2063 https://doi.org/10.1007/s10529-006-9190-8
- Sigalotti, L., E. Fratta, S. Coral, S. Tanzarella, R. Danielli, F. Colizzi, E. Fonsatti, C. Traversari, M. Altomonte, and M. Maio. 2004. Intratumor heterogeneity of cancer/testis antigens expression in human cutaneous melanoma is methylation-regulated and functionally reverted by 5-aza-2'-deoxycytidine. Cancer Res. 64: 9167-9171 https://doi.org/10.1158/0008-5472.CAN-04-1442
- Smith, S. S. 1994. Biological implications of the mechanism of action of human DNA (cytosine-5) methyltransferase. Prog. Nucleic Acid Res. Mol. Biol. 49: 65-111 https://doi.org/10.1016/S0079-6603(08)60048-3
- Stephens, P., P. Grenard, P. Aeschlimann, M. Langley, E. Blain, R. Errington, D. Kipling, D. Thomas, and D. Aeschlimann. 2004. Crosslinking and G-protein functions of transglutaminase 2 contribute differentially to fibroblast wound healing responses. J. Cell Sci. 117: 3389-3403 https://doi.org/10.1242/jcs.01188
- Strathdee, G., T. L. Holyoake, A. Sim, A. Parker, D. G. Oscier, J. V. Melo, S. Meyer, T. Eden, A. M. Dickinson, J. C. Mountford, H. G. Jorgensen, R. Soutar, and R. Brown. 2007. Inactivation of HOXA genes by hypermethylation in myeloid and lymphoid malignancy is frequent and associated with poor prognosis. Clin. Cancer Res. 13: 5048-5055 https://doi.org/10.1158/1078-0432.CCR-07-0919
- Struhl, K. 1998. Histone acetylation and transcriptional regulatory mechanisms. Genes Dev. 12: 599-606 https://doi.org/10.1101/gad.12.5.599
- Tate, P. H. and A. P. Bird. 1993. Effects of DNA methylation on DNA-binding proteins and gene expression. Curr. Opin. Genet. Dev. 3: 226-231 https://doi.org/10.1016/0959-437X(93)90027-M
- Thiery, J. P. 2002. Epithelial-mesenchymal transitions in tumor progression. Nat. Rev. Cancer 2: 442-454 https://doi.org/10.1038/nrc822
- Traversari, C., P. van der Bruggen, I. F. Luescher, C. Lurquin, P. Chomez, A. Van Pel, et al. 1992. A nonapeptide encoded by human gene MAGE-1 is recognized on HLA-A1 by cytolytic T lymphocytes directed against tumor antigen MZ2-E. J. Exp. Med. 176: 1453-1457 https://doi.org/10.1084/jem.176.5.1453
- Udabage, L., G. R. Brownlee, M. Waltham, T. Blick, E. C. Walker, P. Heldin, S. K. Nilsson, E. W. Thompson, and T. J. Brown. 2005. Antisense-mediated suppression of hyaluronan synthase 2 inhibits the tumorigenesis and progression of breast cancer. Cancer Res. 65: 6139-6150 https://doi.org/10.1158/0008-5472.CAN-04-1622
- Van den Bruggen, P., C. Travesari, P. Chomez, C. Lurquin, E. De Plaen, B. Van der Eynde, A. Knuth, and T. Boon. 1991. A gene encoding an antigen recognized by cytolytic T lymphocytes. Science 254: 1643-1647 https://doi.org/10.1126/science.1840703
- Van den Eynde, B., O. Peeters, O. De Backer, B. Gaugler, S. Lucas, and T. Boon. 1995. A new family of genes coding for an antigen recognized by autologous cytolytic T lymphocytes on a human melanoma. J. Exp. Med. 182: 689-698 https://doi.org/10.1084/jem.182.3.689
- Wischnewski, F., K. Pantel, and H. Schwarzenbach. 2006. Promoter demethylation and histone acetylation mediate gene expression of MAGE-A1, -A2, -A3, and -A12 in human cancer cells. Mol. Cancer Res. 4: 339-349 https://doi.org/10.1158/1541-7786.MCR-05-0229
- Wischnewski, F., O. Friese, K. Pantel, and H. Schwarzenbach. 2007. Methyl-CpG binding domain proteins and their involvement in the regulation of the MAGE-A1, MAGE-A2, MAGE-A3, and MAGE-A12 gene promoters. Mol. Cancer Res. 5: 749-759 https://doi.org/10.1158/1541-7786.MCR-06-0364