Acknowledgement
Supported by : Rural Development Administration
References
- Becker, J., and Heun, M. (1995). Mapping of digested and undigested random amplified microsatellite polymorphisms in barley. Genome 38, 991-998 https://doi.org/10.1139/g95-130
- Cifarelli, R.A., Gallitelli, M., and Cellini, F. (1995). Random amplified hybridization microsatellites (RAHM): isolation of a new class of microsatellite-containing DNA clones. Nucleic Acids Res. 23, 3802-3803 https://doi.org/10.1093/nar/23.18.3802
- Davila, J.A., Loarce, Y., Ramsay, L., Waugh, R., and Ferrer, E. (1999). Comparison of RAMP and SSR markers for the study of wild barley genetic diversity. Hereditas 131, 5-13 https://doi.org/10.1111/j.1601-5223.1999.00005.x
- Givry, S.D., Bouchez, M., Chabrier, P., Milan, D., and Schiex, T. (2005). CarthaGene: multipopulation integrated genetic and radiation hybrid mapping. Bioinformatics 21, 1703-1704 https://doi.org/10.1093/bioinformatics/bti222
-
Kang, B.C., Nahm, S.H., Huh, J.H., Yoo, H.S., Yu, J.W., Lee, M.H., and Kim, B.D. (2001). An interspecific (Capsicum annuuum
$\times$ C. chinense)$F_2$ linkage map in pepper using RFLP and AFLP markers. Theor. Appl. Genet. 102, 531-539 https://doi.org/10.1007/s001220051678 - Kaukinen, J., and Varvio, S.-L. (1992). Artiodactyl retroposons: association with microsatellites and use in SINEmorph detection by PCR. Nucleic Acids Res. 20, 2955-2958 https://doi.org/10.1093/nar/20.12.2955
- Kim, H.J., Lee, H.R., Han, J.H., Yeom, S.I., Harn, C.H., and Kim, B.D. (2008). Marker production by PCR amplification with primer pairs from conserved sequences of WRKY genes in chili pepper. Mol. Cells 25, 196-204
- Kwon, Y.S., Lee, J.M., Yi, G.B., Yi, S.I., Kim, K.M., Soh, E.H., Bae K.M., Park, E.K., Song, I.H., and Kim, B.D. (2005). Use of SSR markers to complement tests of distinctiveness, uniformity, and stability (DUS) of Pepper (Capsicum annuum L.) varieties. Mol. Cells 19, 428-435
- Ledbetter, S.A., Nelson, D.L., Warren, S.T., and Ledbetter, D.H. (1990). Rapid isolation of DNA probes within specific chromosome regions by interspersed repetitive sequence polymerase chain reaction. Genomics 6, 475-48 https://doi.org/10.1016/0888-7543(90)90477-C
- Lee, J.M., Nahm, S.H., Kim, Y.M., and Kim, B.D. (2004). Characterization and molecular genetic mapping of microsatellite loci in pepper. Theor. Appl. Genet. 108, 619-627 https://doi.org/10.1007/s00122-003-1467-x
- Litt, M., and Luty, J.A. (1989). A hypervariable microsatellite revealed by in vitro amplification of a dinuleotide repeat within the cardiac muscle action gene. Am. J. Hum. Genet. 44, 397-401
- Livingstone, K.D., Lackney, V.K., Blauth, J.R., Wijk, R.V., and Jahn, M.K. (1999). Genome mapping in Capsicum and the evolution of genome structure in the Solanaceae. Genetics 152, 1183-1202
- Morgante, M., and Olivieri, A.M. (1993). PCR-amplified microsatellites as markers in plant genetics. Plant J. 3, 175-182 https://doi.org/10.1111/j.1365-313X.1993.tb00020.x
- Nybon, H. (2004). Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Mol. Ecol. 13, 1143-1155 https://doi.org/10.1111/j.1365-294X.2004.02141.x
- Parsons, B., and Heflich, R. (1997). Genotypic selection methods for the direct analysis of point mutations. Mut. Res. 387, 97-121 https://doi.org/10.1016/S1383-5742(97)00026-4
- Richardson, T., Cato, S., Ramser, J., Kahl, G., and Weising, K. (1995). Hybridization of microsatellites to RAPD: a new source of polymorphic markers. Nucleic Acids Res. 23, 3798-3799 https://doi.org/10.1093/nar/23.18.3798
- Sambrook, J., Fritsch, E.F., and Maniatis, T. (1989). Molecular Cloning: A Laboratory Manual, 2nd ed. (New York, USA: Cold Spring Harbor Laboratory Press)
- Saha, T., Roy, C.B., and Nazeer, M.A. (2005). Microsatellite variability and its use in the characterization of cultivated clones of Hevea brasiliensis. Plant Breed. 124, 86-92 https://doi.org/10.1111/j.1439-0523.2004.01053.x
- Squirrell, J., Hollingsworth, P.M., Woodhead, M., Russell, J., Lowe, A. J., and Gibby, M. (2003). How much effort is required to isolate nuclear microsatellites from plants? Mol. Ecol 12, 1339-1348 https://doi.org/10.1046/j.1365-294X.2003.01825.x
- Voorrips, R.E. (2002). MapChart: software for the graphical presentation of linkage maps and QTLs. J. Hered. 93, 77-78 https://doi.org/10.1093/jhered/93.1.77
- Wang, Z., Weber, J.L., Zhong, G., and Tanksley, S.D. (1994). Survey of plant short tandem DNA repeats. Theor. Appl. Genet. 88, 1-6
- Wu, K.-S., Jones, R., Danneberger, L., and Scolnik, P.A. (1994). Detection of microsatellite polymorphisms without cloning. Nucleic Acids Res. 22, 3257-3258 https://doi.org/10.1093/nar/22.15.3257
- Yi, G., Lee, J.M., Lee, S., Choi, D., and Kim, B.D. (2006). Exploitation of pepper EST-SSRs and an SSR-based linkage map. Theor. Appl. Genet. 114, 113-130 https://doi.org/10.1007/s00122-006-0415-y
- Zietkiewicz, E., Rafalski, A., and Labuda, D. (1994). Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification. Genomics 20, 176-183 https://doi.org/10.1006/geno.1994.1151