Acknowledgement
Supported by : Rural Development Administration
References
- Andrake, M.D. and Skalka, A.M. (1996). Retroviral integrase, putting the pieces together. J. Biol. Chem. 271, 19633-19636 https://doi.org/10.1074/jbc.271.33.19633
- Baillie, G.J. and Wilkins, R.J. (2001). Endogenous type D retrovirus in a marsupial, the common brushtail possum (Trichosurus vulpecula). J. Virol. 75, 2499-2507 https://doi.org/10.1128/JVI.75.5.2499-2507.2001
- Baillie, G.J., van de Lagemaat, L.N., Baust, C., and Mager, D.L. (2004). Multiple groups of endogenous beta retroviruses in mice, rats, and other mammals. J. Virol. 78, 5784-5798 https://doi.org/10.1128/JVI.78.11.5784-5798.2004
- Chen, R. (1982). Complete amino acid sequence and glycosylation sites of glycoprotein gp71A of Friend murine leukemia virus. Proc. Natl. Acad. Sci. USA 79, 5788-5792
- Choi, Y., Kappler, J.W., and Marrack, P. (1991). A superantigen encoded in the open reading frame of the 3′ long terminal repeat of mouse mammary tumour virus. Nature 350, 203-207 https://doi.org/10.1038/350203a0
- Coffin, J.M. (1990). Retroviridae and their replication. In Virology, Fields, B.N., Knipe, D.M. et al., eds. (New York, USA: Raven Press), pp. 1437-1500
- Coffin, J.M., Hughes, S.H., and Varmus, H.E. (1997). Retroviruses (New York, Cold Spring Harbor Laboratory Press)
- Cousens, C., Minguijon, E., Dalziel, R.G., Ortin, A., Garcia, M., Park, J., Gonzalez, L., Sharp, J.M., and de las Heras, M. (1999). Complete sequence of enzootic nasal tumor virus, a retrovirus associated with transmissible intranasal tumors of sheep. J. Virol. 73, 3986-3993
- Craven, R.C., Leure-duPree, A.E., Weldon, R.A. Jr., and Wills, J.W. (1995). Genetic analysis of the major homology region of the Rous sarcoma virus Gag protein. J. Virol. 69, 4213-4227
- Elder, J.H., Lerner, D. L., Hasselkus-Light, C. S., Fontenot, D. J., Hunter, E., Luciw, P.A., Montelaro, R.C., and Phillips, T.R. (1992). Distinct subsets of retroviruses encode dUTPase. J. Virol. 66, 1791-1794
- Herniou, E., Martin, J., Miller, K., Cook, J., Wilkinson, M., and Tristem, M. (1998). Retroviral diversity and distribution in vertebrates. J. Virol. 72, 5955-5966
- Huh, J.W., Kim, D.S., Ha, H.S., Kim, T.H., Kim, W., and Kim, H.S. (2006). Formation of a new solo-LTR of the human endogenous retrovirus H family in human chromosome 21. Mol. Cells 22, 360-363
- Kang, S.M., Zhang, Z., and Morrow, C.D. (1999). Identification of a human immunodeficiency virus type 1 that stably uses tRNALys1,2 rather than tRNALys,3 for initiation of reverse transcription. Virology 257, 95-105 https://doi.org/10.1006/viro.1999.9615
- Klymiuk, N., Müller, M., Brem, G., and Aigner, B. (2003). Characterization of endogenous retroviruses in sheep. J. Virol. 77, 11268-11273 https://doi.org/10.1128/JVI.77.20.11268-11273.2003
- Kumar, S., Tamura, K., and Nei, M. (2004). MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform. 5, 150-163 https://doi.org/10.1093/bib/5.2.150
- Mager, D.L. and Freeman, J.D. (2000). Novel mouse type D endogenous proviruses and ETn elements share long terminal repeat and internal sequences. J. Virol. 74, 7221-7229 https://doi.org/10.1128/JVI.74.16.7221-7229.2000
- McGeoch, D.J. (1990). Protein sequence comparisons show that the 'pseudoproteases'encoded by poxviruses and certain retroviruses belong to the deoxyuridine triphosphatase family. Nucleic Acids Res. 18, 4105-4110 https://doi.org/10.1093/nar/18.14.4105
- Ono, M., Yasunaga, T., Miyata, T., and Ushikubo, H. (1986). Nucleotide sequence of human endogenous retrovirus genome related to the mouse mammary tumor virus genome. J. Virol. 60, 589-598
- Palmarini, M., Hallwirth, C., York, D., Murgia, C., de Oliveira, T., Spencer, T., and Fan, H. (2000). Molecular cloning and functional analysis of three type D endogenous retroviruses of sheep reveal a different cell tropism from that of the highly related exogenous jaagsiekte sheep retrovirus. J. Virol. 74, 8065-8076 https://doi.org/10.1128/JVI.74.17.8065-8076.2000
- Patience, C., Wilkinson, D.A., and Weiss, R.A. (1997). Our retroviral heritage. Trends Genet. 13, 116-120 https://doi.org/10.1016/S0168-9525(97)01057-3
- Power, M.D., Marx, P.A., Bryant, M.L., Gardner, M.B., Barr, P.J., and Luciw, P.A. (1986). Nucleotide sequence of SRV-1, a type D simian acquired immune deficiency syndrome virus. Science 231, 1567-1572 https://doi.org/10.1126/science.3006247
- Reus, K., Mayer, J., Sauter, M., Scherer, D., Muller-Lantzsch, N., and Meese, E. (2001). Genomic organization of the human endogenous retrovirus HERV-K (HML-2.HOM) (ERVK6) on chromosome 7. Genomics 72, 314-320 https://doi.org/10.1006/geno.2000.6488
- Robert, G. and Michael, T. (2003). The evolution, distribution and diversity of endogenous retroviruses. Virus Genes 26, 291-315 https://doi.org/10.1023/A:1024455415443
- Seiki, M., Hattori, S., Hirayama, Y., and Yoshida, M. (1983). Human adult T-cell leukemia virus: complete nucleotide sequence of the provirus genome integrated in leukemia cell DNA. Proc. Natl. Acad. Sci. USA 80, 3618-3622
- Temin, H.M. (1981). Structure, variation and synthesis of retrovirus long terminal repeat. Cell 27, 1-3 https://doi.org/10.1016/0092-8674(81)90353-6
- van der Kuyl, A.C., Mang, R., Dekker, J.T., and Goudsmit, J. (1997). Complete nucleotide sequence of simian endogenous type D retrovirus with intact genome organization: evidence for ancestry to simian retrovirus and baboon endogenous virus. J. Virol. 71, 3666-3676
- Van Regenmortel, M.H., Fauquet, C.M., Bishop, D.H.L., Carsten, E.B., and Estes, M.K. (2000). Virus Taxonomy: The Classification and Nomenclature of Viruses (California; Academic Press)
- Xiao, R., Park, K., Lee, H., Kim, J., and Park, C. (2008). Identification and classification of endogenous retroviruses in cattle. J. Virol. 82, 582-587 https://doi.org/10.1128/JVI.01451-07
- York, D.F., Vigne, R., Verwoerd, D.W., and Querat, G. (1992). Nucleotide sequence of the Jaagsiekte retrovirus, an exogenous and endogenous type D and B retrovirus of sheep and goats. J. Virol. 66, 4930-4939