Comparison of two diagnostic methods, allele-specific real-time PCR and 3'-tailed PCR to discriminate between Salmonella enterica serovars Gallinarum and S Pullorum

Salmonella enterica serovars Gallinarum과 S Pullorum의 감별을 위한 2가지 진단법: allele-specific real-time PCR과 3'-tailed PCR의 비교

  • Lee, Se-Mi (BK21 Biotherapy Human Resources Center) ;
  • Seo, Ja-Young (College of Veterinary Medicine, Chonnam National University) ;
  • Lee, Jae-Il (College of Veterinary Medicine, Chonnam National University) ;
  • Kim, Tae-Jung (BK21 Biotherapy Human Resources Center)
  • 이세미 (BK21 바이오치료인력양성팀) ;
  • 서자영 (전남대학교 수의과대학) ;
  • 이재일 (전남대학교 수의과대학) ;
  • 김태중 (BK21 바이오치료인력양성팀)
  • Published : 2008.11.30

Abstract

Salmonella enterica serovars Gallinarum(SG, causative agent of fowl typhoid) and S Pullorum(SP, causative agent of pullorum disease) are very important bacterial pathogens in poultry industry. They share some common antigenic properties though the characteristics of outbreaks are quite different. To discriminate between SG and SP, we developed two rapid diagnostic methods, allele-specific real-time PCR and 3'-tailed PCR over 2 single nucleotide polymorphisms ($237^{th}\;and\;598^{th}$). In both methods, $237^{th}$ allele was found to be a good target for differential diagnosis, while $598^{th}$ allele produced some non-specific reactions.

Keywords

References

  1. Ewing WH. 1986. Edwards and Ewing's Identification of Enterobacteriaceae. 4 ed. Elsevier's Science. New York : 81-318
  2. Shah DH, Roy A, Purohit JH. 2000. Comparative efficacy of different culture media used for isolation of Salmonella gallinarum. Indian J Comp Microbiol Immunol Infect Dis 21 : 79-80
  3. Gast RK. 1997. Detecting infections of chickens with recent Salmonella pullorum isolates using standard serological methods. Poult Sci 76 : 17-23 https://doi.org/10.1093/ps/76.1.17
  4. Shivaprasad HL. 2000. Fowl typhoid and Pullorum disease. Rev Sci Tech 19 : 405-424 https://doi.org/10.20506/rst.19.2.1222
  5. Shah DH, Park JH, Cho MR, et al. 2005. Allele-specific PCR method based on rfbS sequence for distinguishing Salmonella gallinarum from Salmonella pullorum: serotype- specific rfbS sequence polymorphism. J Microbiol Methods 60 : 169-177 https://doi.org/10.1016/j.mimet.2004.09.005
  6. Jia L, Smith NH, Nelson K, et al. 1993. Evolutionary origin and radiation of the avian-adapted non-motile Salmonellae. J Med Microbiol 38 : 129-139 https://doi.org/10.1099/00222615-38-2-129
  7. Liu D, Verma NK, Romana LK, et al. 1991. Relationships among the rfb regions of Salmonella serovars A, B, and D. J Bacteriol 173 : 4814-4819 https://doi.org/10.1128/jb.173.15.4814-4819.1991
  8. Xiang SH, Haase AM, Reeves PR. 1993. Variation of the rfb gene clusters in Salmonella enterica. J Bacteriol 175 : 4877-4884 https://doi.org/10.1128/jb.175.15.4877-4884.1993
  9. Xiang SH, Hobbs M, Reeves PR. 1994. Molecular analysis of the rfb gene cluster of a group D2 Salmonella enterica strain: evidence for its origin from an insertion sequence-mediated recombination event between group E and D1 strains. J Bacteriol 176 : 4357-4365 https://doi.org/10.1128/jb.176.14.4357-4365.1994
  10. Luk JMC, Kongmuang U, Reeves PR, et al. 1993. Selective amplification of abequose and paratose synthetase (rfb) by polymerase chain reaction for identification of Salmonella major serogroups (A, B, C2, and D). J Clin Microbiol 31 : 2118-2123
  11. Luk JMC, Kongmuang U, Tsang RSW, et al. 1997. An enzyme linked immunosorbant assay to detect PCR products of the rfbS gene from serogroup D salmonellae: a rapid screening prototype. J Clin Microbiol 35 : 714-718
  12. Park MK, Choi KS, Kim MC, et al. 2001. Differential diagnosis of Salmonella gallinarum and S. pullorum using PCRRFLP. J Vet Sci 2 : 213-219
  13. Chen W, Martinez G, Mulchandani A. 2000. Molecular Beacons: A real-time polymerase chain reaction assay for detecting Salmonella. Anal Biochem 280 : 166-172 https://doi.org/10.1006/abio.2000.4518
  14. 이영성, 최경성, 김명철 등. 2002. TaqMan 실시간 중합효소 연쇄반응에 의한 살모넬 라속의 검출 및 ompC 항원단백 유전자의 비교. 대한수의학회지 42 : 513-522
  15. 김태중, 박성도, 이재일. 2004. 소 모색관련 MC1R 유전자의 SNP와 관련한 3'-tailed primer를 이용한 한우육의 판별. 동물자원지 46 : 897-902
  16. 박성도, 김태중, 이재일. 2005. 소 모색관련 MC1R 유전자의 SNP와 관련한 MGB probe에 기초한 real-time PCR을 이용한 한우육과 Holstein육의 판별. 대한수의학회 지 45 : 25-28
  17. 김기석, 이희석, 모인필. 1995. 국내 닭에서 의 가금티푸스(Fowl typhoid) 발생. 농업 과학논문집 7 : 544-549
  18. 오강희, 최원필. 1994. 초생추 유래 Salmonella 속균의 생물학적 특성. 대한수의 학회지 34 : 501-510
  19. Gast RK. 2003. Salmonella infections. In: Saif YM, Barnes HJ, Glisson JR, Fadly AM, McDougald LR, Swayne DE (eds.). Diseases of Poultry. 11 eds. Iowa State University Press. Ames : 567-613
  20. Gast RK, Holt PS. 1998. Application of flagellar-based immunoassays for serologic detection of Salmonella pullorum infection in chickens. Avian Dis 42 : 807-811 https://doi.org/10.2307/1592720
  21. Holt PS, Chaubal LH. 1997. Detection of motility and putative synthesis of flagella proteins in Salmonella pullorum cultures. J Clin Microbiol 35 : 1016-1020
  22. Thorns CJ, Sojka MG, McLaren IM, et al. 1992. Characterization of monoclonal antibodies against fimbrial structure of Salmonella enteritidis and certain other serogroup D salmonellae and their application as serotyping reagents. Res Vet Sci 53 : 300-308 https://doi.org/10.1016/0034-5288(92)90130-T
  23. Lampel KA, Keasler SP, Hanes DE. 1996. Specific detection of Salmonella enterica serotype Enteritidis using polymerase chain reaction. Epidemiol Infect 116 : 137-145 https://doi.org/10.1017/S0950268800052365
  24. Cha SY, Jang DH, Kim SM, et al. 2008. Rapid Detection and discrimination of the three Salmonella serotypes, S. Pullorum, S. Gallinarum and S. Enteritidis by PCR-RFLP of ITS and fliC Genes. Korean J Poultry Sci 35 : 9-13 https://doi.org/10.5536/KJPS.2008.35.1.009
  25. Kwon HJ, Park KY, Yoo HS, et al. 2000. Differentiation of Salmonella enterica serotype gallinarum biotype pullorum from biotype gallinarum by analysis of phase 1 flagellin C gene (fliC). J Microbiol Methods 40 : 33-38 https://doi.org/10.1016/S0167-7012(99)00129-3
  26. Kisiela D, Kuczkowski M, Kiczak L, et al. 2005. Differentiation of Salmonella Gallinarum biovar Gallinarum from Salmonella Gallinarum biovar Pullorum by PCR-RFLP of the fimH gene. J Vet Med B Infect Dis Vet Public Health 52 : 214-218 https://doi.org/10.1111/j.1439-0450.2005.00846.x
  27. Verma N, Reeves P. 1989. Identification and sequence of rfbS and rfbE, which determine antigenic specificity of group A and group D Salmonellae. J Bacteriol 171 : 5694-5701 https://doi.org/10.1128/jb.171.10.5694-5701.1989