Bulletin of the Korean Chemical Society

Korean Chemical Society (대한화학회)
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Kinetics and Mechanism for the Formation of b- and y-type Ions from Singly Protonated Peptides on a Microsecond Time Scale: The Arginine Mystery

  • Chung, Yeon-Ji (Department of Chemistry, Seoul National University) ;
  • Yoon, So-Hee (Department of Chemistry, Seoul National University) ;
  • Kim, Myung-Soo (Department of Chemistry, Seoul National University)
  • Published : 2008.12.20
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References

  1. Mann, M.; Hendrickson, R. C.; Pandey, A. Annu. Rev. Biochem. 2001, 70, 437. https://doi.org/10.1146/annurev.biochem.70.1.437
  2. Kinter, M.; Sherman, N. E. Protein Sequencing and Identification Using Tandem Mass Spectrometry; Desiderio, D. M.; Nibbering, N. M. M., Eds.; John Wiley: New York, U. S. A., 2005.
  3. Hernandez, P.; Müller, M.; Appel, R. D. Mass Spectrom. Rev. 2006, 25, 235. https://doi.org/10.1002/mas.20068
  4. Yoon, T. O.; Choi, C. M.; Kim, H. J.; Kim, N. J. Bull. Korean Chem. Soc. 2007, 28, 619. https://doi.org/10.5012/bkcs.2007.28.4.619
  5. Cotter, R. J. Time-of-Flight Mass Spectrometry; ACS: Washington, U. S. A., 1997; p 237.
  6. Cole, R. B. Electrospray Ionization Mass Spectrometry; Wiley-Interscience: New York, 1997.
  7. Hillenkamp, F.; Karas, M.; Beavis, R. C.; Chait, B. T. Anal. Chem. 1991, 63, 1193A. https://doi.org/10.1021/ac00013a003
  8. Wysocki, V. H.; Tsaprailis, G.; Smith, L. L.; Breci, L. A. J. Mass Spectrom. 2000, 35, 1399. https://doi.org/10.1002/1096-9888(200012)35:12<1399::AID-JMS86>3.0.CO;2-R
  9. Summerfield, S. G.; Whiting, A.; Gaskell, S. J. Int. J. Mass Spectrom. Ion Processes 1997, 162, 149. https://doi.org/10.1016/S0168-1176(96)04512-0
  10. Rodriquez, C. F.; Cunje, A.; Shoeib, T.; Chu, I. K.; Hopkinson, A. C.; Siu, K. W. M. J. Am. Chem. Soc. 2001, 123, 3006. https://doi.org/10.1021/ja0015904
  11. Paizs, B.; Suhai, S. Rapid Commun. Mass Spectrom. 2002, 16, 375. https://doi.org/10.1002/rcm.586
  12. Paizs, B.; Suhai, S. J. Am. Soc. Mass Spectrom. 2004, 15, 103. https://doi.org/10.1016/j.jasms.2003.09.010
  13. Paizs, B.; Suhai, S. Mass Spectrom. Rev. 2005, 24, 508. https://doi.org/10.1002/mas.20024
  14. Polce, M. J.; Ren, D.; Wesdemiotis, C. J. Mass Spectrom. 2000, 35, 1391.
  15. Cox, K. A.; Gaskell, S. J.; Morris, M.; Whiting, A. J. Am. Soc. Mass Spectrom. 1996, 7, 522. https://doi.org/10.1016/1044-0305(96)00019-0
  16. Yoon, S. H.; Kim, M. S. J. Am. Soc. Mass Spectrom. 2007, 18, 1729. https://doi.org/10.1016/j.jasms.2007.07.010
  17. Yoon, S. H.; Chung, Y. J.; Kim, M. S. J. Am. Soc. Mass Spectrom. 2008, 19, 645. https://doi.org/10.1016/j.jasms.2008.02.003
  18. Robinson, P. J.; Holbrook, K. A. Unimolecular Reactions; Wiley Interscience: New-York, 1972; p 52.
  19. Rosenstock, H. M.; Wallenstein, M. B.; Wahrhaftig, A. L.; Eyring, H. Proc. Natl. Acad. Sci. U.S.A. 1952, 38, 667. https://doi.org/10.1073/pnas.38.8.667
  20. Baer, T.; Hase, W. L. Unimolecular Reaction Dynamics: Theory and Experiments; Oxford Univ. Press: New York, 1996; p 171.
  21. Moon, J. H.; Oh, J. Y.; Kim, M. S. J. Am. Soc. Mass Spectrom. 2006, 17, 1749. https://doi.org/10.1016/j.jasms.2006.08.001
  22. Moon, J. H.; Sun, M.; Kim, M. S. J. Am. Soc. Mass Spectrom. 2007, 18, 1063. https://doi.org/10.1016/j.jasms.2007.03.012
  23. Sun, M.; Moon, J. H.; Kim, M. S. J. Phys. Chem. B 2007, 111, 2747. https://doi.org/10.1021/jp066453t
  24. Holbrook, K. A.; Pilling, M. J.; Robertson, S. H. Unimolecular Reactions, 2nd ed.; Wiley: Chichester, UK, 1996.
  25. Lifshitz, C. Adv. Mass Spectrom. 1989, 11A, 713.
  26. Beyer, T.; Swinehart, D. F. Commun. ACM 1973, 16, 379. https://doi.org/10.1145/362248.362275
  27. Baer, T.; Hase, W. L. Unimolecular Reaction Dynamics: Theory and Experiments; Oxford Univ. Press: New York, 1996; p 272.
  28. Laskin, J.; Denisov, E.; Futrell, J. H. Int. J. Mass Spectrom. 2002, 219, 189. https://doi.org/10.1016/S1387-3806(01)00582-6
  29. Johnson, R. S.; Martin, S. A.; Biemann, K. Int. J. Mass Spectrom. Ion Processes 1988, 86, 137. https://doi.org/10.1016/0168-1176(88)80060-0
  30. Bythell, B. J.; Barofsky, D. F.; Pingitore, F.; Polce, M. J.; Wang, P.; Wesdemiotis, C.; Paizs, B. J. Am. Soc. Mass Spectrom. 2007, 18, 1921. https://doi.org/10.1016/j.jasms.2007.08.005
  31. Wyttenbach, T.; von Helden, G.; Bowers, M. T. J. Am. Chem. Soc. 1996, 118, 8355. https://doi.org/10.1021/ja9535928
  32. Lias, S. G.; Liebman, J. F.; Levin, R. D. J. Phys. Chem. Ref. Data 1984, 13, 695. https://doi.org/10.1063/1.555719
  33. Harrison, A. G. Mass Spectrom. Rev. 1997, 16, 201. https://doi.org/10.1002/(SICI)1098-2787(1997)16:4<201::AID-MAS3>3.0.CO;2-L
  34. Maksiæ, Z. B.; Kovaèeviæ, B. Chem. Phys. Lett. 1999, 307, 497. https://doi.org/10.1016/S0009-2614(99)00535-7
  35. Vishveshwara, S.; Pople, J. A. J. Am. Chem. Soc. 1977, 99, 2422. https://doi.org/10.1021/ja00450a004
  36. Suenram, R. D.; Lovas, F. J. J. Mol. Spectrosc. 1978, 72, 372. https://doi.org/10.1016/0022-2852(78)90137-6
  37. Kang, Y. K.; Byun, B. J.; Kim, Y. H.; Kim, Y. H.; Lee, D. H.; Lee, J. Y. Bull. Korean Chem. Soc. 2008, 29, 1149. https://doi.org/10.5012/bkcs.2008.29.6.1149
  38. Lifshitz, C. Mass Spectrom. Rev. 1982, 1, 309. https://doi.org/10.1002/mas.1280010402

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