References
- Cannone, J.J., S. Subramanian, M.N. Schnare, J.R. Collett, L.M. D'Souza, Y. Du, B. Feng, N. Lin, L.V. Madabusi, K.M. Müller, N. Pande, Z. Shang, N. Yu, and R.R. Gutell. 2002. The Comparative RNA Web (CRW) Site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs. BMC Bioinformatics 3, 2 https://doi.org/10.1186/1471-2105-3-32
- Cate, J.H., M.M. Yusupov, G.Z. Yusupova, T.N. Earnest, and H.F. Noller. 1999. X-ray crystal structures of 70S ribosome functional complexes. Science 285, 2095-2104 https://doi.org/10.1126/science.285.5436.2095
-
Clemons, W.M., Jr., J.L. May, B.T. Wimberly, J.P. McCutcheon, M.S. Capel, and V. Ramakrishnan. 1999. Structure of a bacterial 30S ribosomal subunit at 5.5
${\AA}$ resolution. Nature 400, 833- 840 https://doi.org/10.1038/23631 - Dinos, G., D.N. Wilson, Y. Teraoka, W. Szaflarski, P. Fucini, D. Kalpaxis, and K.H. Nierhaus. 2004. Dissecting the ribosomal inhibition mechanisms of edeine and pactamycin: the universally conserved residues G693 and C795 regulate P-site RNA binding. Mol. Cell. 13, 113-124 https://doi.org/10.1016/S1097-2765(04)00002-4
- Gutell, R.R., N. Larsen, and C.R. Woese. 1994. Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective. Microbiol. Rev. 58, 10-26
- Higuchi, R. 1989. Using PCR to engineer DNA, p. 61-70. In H.A. Erlich (ed.). PCR Technology, Stockton Press, New York, USA
- Kim, H.-M., J.-H. Yeom, H.-J. Ha, and K. Lee. 2007. Functional analysis of the residues C770 and G771 of E. coli 16S rRNA implicated in forming the intersubunit bridge B2c of the ribosome. J. Microbiol. Biotechnol. 17, 1204-1207
- Lee, K., C.A. Holland-Staley, and P.R. Cunningham. 1996. Genetic analysis of the Shine-Dalgarno interaction: selection of alternative functional mRNA-rRNA combinations. RNA 2, 1270-1285
- Lee, K., S. Varma, J. Santalucia, Jr., and P.R. Cunningham. 1997. In vivo determination of RNA structure-function relationships: analysis of the 790 loop in ribosomal RNA. J. Mol. Biol. 269, 732-743 https://doi.org/10.1006/jmbi.1997.1092
- Lee, K., C.A. Holland-Staley, and P.R. Cunningham. 2001. Genetic approaches to studying protein synthesis: Effects of mutations at Ψ516 and A535 in Escherichia coli 16S rRNA. J. Nutr. 131, 2994S-3004S
- Mankin, A.S. 1997. Pactamycin resistance mutations in functional sites of 16S rRNA. J. Mol. Biol. 274, 8-15 https://doi.org/10.1006/jmbi.1997.1387
- Moazed, D. and H.F. Noller. 1986. Transfer RNA shields specific nucleotides in 16S ribosomal RNA from attack by chemical probes. Cell 47, 985-994 https://doi.org/10.1016/0092-8674(86)90813-5
- Moazed, D. and H.F. Noller. 1987. Interaction of antibiotics with functional sites in 16S ribosomal RNA. Nature 327, 389-394 https://doi.org/10.1038/327389a0
- Moazed, D., R.R. Samaha, C. Gualerzi, and H.F. Noller. 1995. Specific protection of 16S rRNA by translational initiation factors. J. Mol. Biol. 248, 207-210
- Morosyuk, S.V., K. Lee, J. Santalucia, Jr., and P.R. Cunningham. 2000. Structure and function of the conserved 690 hairpin in Escherichia coli 16S ribosomal RNA: analysis of the stem nucleotides. J. Mol. Biol. 300, 113-126 https://doi.org/10.1006/jmbi.2000.3852
- Muralikrishna, P. and E. Wickstrom. 1989. Escherichia coli initiation factor 3 protein binding to 30 S ribosomal subunits alters the accessibility of nucleotides within the conserved central region of 16S rRNA. Biochemistry 28, 7505-7510 https://doi.org/10.1021/bi00445a002
- Yusupov, M.M., G.Z. Yusupova, A. Baucom, K. Lieberman, T.N. Earnest, J.H. Cate, and H.F. Noller. 2001. Crystal structure of the ribosome at 5.5 A resolution. Science 292, 883-896 https://doi.org/10.1126/science.1060089
- Wimberly, B.T., D.E. Brodersen, W.M. Clemons, Jr., R.J. Morgan- Warren, A.P. Carter, C. Vonrhein, T. Hartsch, and V. Ramakrishnan. 2000. Structure of the 30S ribosomal subunit. Nature 407, 327-339 https://doi.org/10.1038/35030006