DOI QR코드

DOI QR Code

African Maternal Origin and Genetic Diversity of Chinese Domestic Donkeys

  • Lei, Chu-Zhao (College of Animal Science and Technology, Northwest A&F University Shaanxi Key Laboratory of Molecular Biology for Agriculture) ;
  • Ge, Qing-Lan (Northwest A&F University Shaanxi Key Laboratory of Molecular Biology for Agriculture) ;
  • Zhang, Hu-Cai (Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences (CAS)) ;
  • Liu, Ruo-Yu (College of Animal Science and Technology, Guizhou University) ;
  • Zhang, Wei (College of Animal Science and Technology, Northwest A&F University Shaanxi Key Laboratory of Molecular Biology for Agriculture) ;
  • Jiang, Yong-Qing (College of Animal Science and Technology, Northwest A&F University Shaanxi Key Laboratory of Molecular Biology for Agriculture) ;
  • Dang, Rui-Hua (College of Animal Science and Technology, Northwest A&F University Shaanxi Key Laboratory of Molecular Biology for Agriculture) ;
  • Zheng, Hui-Ling (College of Animal Science and Technology, Northwest A&F University Shaanxi Key Laboratory of Molecular Biology for Agriculture) ;
  • Hou, Wen-Tong (College of Animal Science and Technology, Northwest A&F University Shaanxi Key Laboratory of Molecular Biology for Agriculture) ;
  • Chen, Hong (College of Animal Science and Technology, Northwest A&F University Shaanxi Key Laboratory of Molecular Biology for Agriculture)
  • Received : 2006.09.01
  • Accepted : 2006.11.27
  • Published : 2007.05.01

Abstract

The origin of domestic donkeys in China has been controversial. To clarify the origin of Chinese domestic donkeys, we investigated the partial mitochondrial D-loop sequences of 126 samples from 12 native breeds. The results revealed two mitochondrial origins, lineage Somali and lineage Nubian of African wild ass detected in Chinese domestic donkeys. Lineage Somali was predominant in Chinese domestic donkey breeds. The pattern of genetic variation in ass mtDNA D-loop sequences indicated that the two lineages Somali and Nubian from China had undergone population expansion events. In a combined analysis of lineages Somali and Nubian between previously published sequences from other countries/regions and sequences of Chinese domestic donkeys, the results indicated that the two lineages of Chinese domestic donkeys were from Africa and supported the African maternal origins of Chinese domestic donkeys. There was no obvious geographical structure in Chinese domestic donkey breeds, but the population showed abundant mtDNA diversity. The spread routes of Chinese domestic donkeys were also discussed.

Keywords

References

  1. Aranguren-Mendez, J., A. Beja-Pereira, R. Avellanet, K. Dzama and J. Jordana. 2004. Mitochondrial DNA variation and genetic relationships in Spanish donkey breeds (Equus asinus). J. Anim. Breed. Genet. 121:319-330. https://doi.org/10.1111/j.1439-0388.2004.00464.x
  2. Bandlet, H. J., P. Forster and A. Rohl. 1999. Median joining networks for inferring intraspecific phylogenies. Mol. Biol. Evol. 16:37-48. https://doi.org/10.1093/oxfordjournals.molbev.a026036
  3. Beja-Pereira, A. P., R. England, N. Ferrand, S. Jordan, A. O. Bakhiet, M. A. Abdalla, M. J. Mashkour, J. Jordana, P. Taberlet and G. Luikart. 2004. African origins of the domestic donkey. Sci. 304:1781. https://doi.org/10.1126/science.1096008
  4. Chen, S. Y., Y. H. Su, S. F. Wu, T. Sha and Y. P. Zhang. 2005. Mitochondrial diversity and phylogeographic structure Chinese domestic goats. Mol. Phylogenet. Evol. 37:804-814. https://doi.org/10.1016/j.ympev.2005.06.014
  5. Donnelly, P., S. Tavare, D. J. Balding and R. C. Griffiths. 1996. Estimating the age of the common ancestor of men from the ZFY intron. Sci. 272:1357-1359. https://doi.org/10.1126/science.272.5266.1357
  6. Ivankovic, A., T. Kavar, P. Caput, B. Mioc, V. Pavic and P. Dovc. 2002. Genetic diversity of three donkey populations in the Croatial region. Anim. Genet. 33:169-177. https://doi.org/10.1046/j.1365-2052.2002.00879.x
  7. Jeon, G. J., H. Y. Chung, J. G. Choi, M. S. Lee, C. W. Lee, J. J. Park, J. M. Ha, H. K. Lee and H. H. Sung. 2005. Relationship between genetic variants of mitochondrial DNA and growth traits in Hanwoo cattle. Asian-Aust. J. Anim. Sci. 18(3):301-307. https://doi.org/10.5713/ajas.2005.301
  8. Kumar, S., K. Tamura, I. B. Jakobsen and M. Nei. 2001. MEGA2: Molecular Evolutionary Genetics Analysis Software. Arizona State University, Tempe, AZ, USA.
  9. Lei, C. Z., H. Chen, G. S. Yang, W. B. Sun, X. Q. Lei, Q. L. Ge, Z. F. Wang, N. Lu, X. Gao and W. T. Hou. 2005. Study on mitochondrial DNA D-loop polymorphism in Chinese donkeys. Acta Genetica Sinica. 32(5):481-486.
  10. Liu, R. Y., C. Z. Lei, S. H. Liu and G. S. Yang. 2007. Genetic diversity and origin of Chinese domestic goats revealed by complete mtDNA D-loop sequence variation. Asian-Aust. J. Anim. Sci. 20(2):178-183
  11. Lopez, C., R. Alonso and A. Aluja. 2005. Study of the genetic origin of the Mexican Creole Donkey (Equus asinus) by means of the analysis of the D-Loop region of mitochondrial DNA. Trop. Anim. Heal. Prod. 37:173-188.
  12. Odahara, S. H., J. Chung, S. H. Choi, S. L. Yu, S. Sasazaki, H. Mannen, C. S. Park and J. H. Lee. 2006. Mitochondrial DNA diversity of Korean native goats. Asian-Aust. J. Anim. Sci. 19(4):482-485. https://doi.org/10.5713/ajas.2006.482
  13. Sasazaki, S., S. Odahara, C. Hiura, F. Mukai and H. Mannen. 2006. Mitochondrial DNA variation and genetic relationships in Japanese and Korean cattle. Asian-Aust. J. Anim. Sci. 19(10):1394-1398. https://doi.org/10.5713/ajas.2006.1394
  14. Savolaninen, P., Y. P. Zhang, J. Luo, J. Lundeberg and T. Leitner. 2002. Genetic evidence for an East Asia origin of domestic dogs. Sci. 298:1610-1613. https://doi.org/10.1126/science.1073906
  15. Schneider, S., D. Roessli and L. Excoffier. 2000. Arlequin: A software for population genetic data analysis. Ver 2.000. Genetics and Biometry Laboratory, University of Geneva, Switzer land.
  16. Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin and D. G. Higgins. 1997. The Clustal-X windows interface: Flexible strategies for multiple sequences alignment aided by quality analysis tools. Nucleic Acids Res.25:4876-4882 https://doi.org/10.1093/nar/25.24.4876
  17. Troy, C. S., D. E. MacHugh, J. F. Balley, D. A. Magee, R. T. Loftus, P. Cunningham, A. T. Chamberlains, B. C. Sykes and D. G. Bradley. 2001. Genetic evidence for Near-Eastern origins of European cattle. Nature 410:1088-1091. https://doi.org/10.1038/35074088
  18. Xie, C. X. 1987. Horse and ass breeds in China. Shanghai Scientific and Technical Publishing House, Shanghai, China.

Cited by

  1. Cytochrome b Genetic Diversity and Maternal Origin of Chinese Domestic Donkey vol.48, pp.7-8, 2010, https://doi.org/10.1007/s10528-010-9345-0
  2. Phylogeography and Domestication of Chinese Swamp Buffalo vol.8, pp.2, 2013, https://doi.org/10.1371/journal.pone.0056552
  3. Ancient DNA provides new insight into the maternal lineages and domestication of Chinese donkeys vol.14, pp.1, 2014, https://doi.org/10.1186/s12862-014-0246-4
  4. Genetic diversity and paternal origin of domestic donkeys vol.48, pp.6, 2017, https://doi.org/10.1111/age.12607
  5. Genetic Relationships among Different Breeds of Chinese Gamecocks Revealed by mtDNA Variation vol.22, pp.8, 2007, https://doi.org/10.5713/ajas.2009.80660
  6. Mitochondrial DNA genetic diversity in six Italian donkey breeds (Equus asinus) vol.29, pp.3, 2018, https://doi.org/10.1080/24701394.2017.1292505
  7. Genetic diversity and relationships of Chinese donkeys using microsatellite markers vol.62, pp.1, 2019, https://doi.org/10.5194/aab-62-181-2019
  8. Genetic diversity and maternal origin of Northeast African and South American donkey populations vol.50, pp.3, 2007, https://doi.org/10.1111/age.12774
  9. Donkey Industry in China: Current Aspects, Suggestions and Future Challenges vol.102, pp.None, 2007, https://doi.org/10.1016/j.jevs.2021.103642