References
- Altschul, S. F., T. L. Madden, A. A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res. 25: 3389-3402 https://doi.org/10.1093/nar/25.17.3389
- Beg, Q. K., M. Kapoor, L. Mahajan, and G. S. Hoondal. 2001. Microbial xylanases and their industrial applications: A review. Appl. Microbiol. Biotechnol. 56: 326-338 https://doi.org/10.1007/s002530100704
- Biely, P. 1985. Microbial xylanolytic systems. Trends Biotechnol. 3: 286-290 https://doi.org/10.1016/0167-7799(85)90004-6
- Chang, P., W.-S. Tsai, C.-L. Tsai, and M.-J. Tseng. 2004. Cloning and characterization of two thermostable xylanases from an alkaliphilic Bacillus firmus. Biochem. Biophys. Res. Commun. 319: 1017-1025 https://doi.org/10.1016/j.bbrc.2004.05.078
- Charles, P. M. Jr, N. Lang, S. F. J. KeGrice, G. Lee, M. Stephens, A. L. Sonenshein, J. Pero, and R. Losick. 1982. Nucleotide sequences that signal the initiation of transcription and translation in Bacillus subtilis. Mol. Gen. Genet. 186: 339-346 https://doi.org/10.1007/BF00729452
- Cho, S.-G. and Y.-J. Choi. 1995. Nucleotide sequence analysis of an endo-xylanase gene (xynA) from Bacillus stearothermophilis. J. Microbiol. Biotechnol. 5: 117-124
-
Coughlan, M. P. and G. P. Hazelwood. 1993.
$\beta$ -1,4-D-Xylandegrading enzyme systems: Biochemistry, molecular biology and applications. Biotechnol. Appl. Biochem. 17: 259-289 - Garen, A. and C. Levinthal. 1960. A fine-structure genetic and chemical study of the enzyme alkaline phosphatase of E. coli: Purification and characterization of alkaline phosphatases. Biochim. Biophys. Acta 38: 470-483 https://doi.org/10.1016/0006-3002(60)91282-8
- Henrissat, B. and A. Bairoch. 1993. New families in the classification of glycosyl hydrolases based on amino acid sequence similarities. Biochem. J. 293: 781-788 https://doi.org/10.1042/bj2930781
- Henrissat, B., T. T. Teeri, and R. A. J. Warren. 1998. A scheme for designating enzymes that hydrolyse the polysaccharides in the cell walls of plants. FEBS Lett. 425: 352-354 https://doi.org/10.1016/S0014-5793(98)00265-8
-
Heo, S.-Y., J.-K. Kim, Y.-M. Kim, and S.-W. Nam. 2004. Xylan hydrolysis by treatment with endoxylanase and
$\beta$ - xylosidase expressed in yeast. J. Microbiol. Biotechnol. 14: 171-177 - Ito, Y., T. Tomita, N. Roy, A. Nakano, N. Sugawara-Tomita, S. Watanabe, N. Okai, N. Abe, and Y. Kamio. 2003. Cloning, expression, and cell surface localization of Paenibacillus sp. strain W-61 xylanase 5, a multidomain xylanase. Appl. Environ. Microbiol. 69: 6969-6978 https://doi.org/10.1128/AEM.69.12.6969-6978.2003
- Ko, E. P., H. Akatsuka, H. Moriyama, A. Shiamyo, Y. Hata, Y. Katsube, I. Urabe, and H. Okada. 1992. Site-directed mutagenesis at aspartate and glutamate residues of xylanase from Bacillus pumilus. Biochem. J. 288: 117-121 https://doi.org/10.1042/bj2880117
- Kubata, K. B., T. Suzuki, H. Horitsu, K. Kawai, and K. Takamizawa. 1992. Xylanase of Aeromonas caviae ME-1 isolated from the intestine of a herbivorous insect (Samia cynthia pryeri). Biosci. Biotechnol. Biochem. 56: 1463- 1464 https://doi.org/10.1271/bbb.56.1463
- Lee, H.-J., D.-J. Shin, N. C. Cho, H.-O. Kim, S.-Y. Shin, S.-Y. Im, H. B. Lee, S.-B. Chun, and S. Bai. 2000. Cloning, expression and nucleotide sequences of two xylanase genes from Paenibacillus sp. Biotechnol. Lett. 22: 387-392 https://doi.org/10.1023/A:1005676702533
- Lee, Y.-E. 2004. Isolation and characterization of thermostable xylanase-producing Paenibacillus sp. DG-22. Kor. J. Microbiol. Biotechnol. 32: 22-28
- Lee, Y.-E. and P. O. Lim. 2004. Purification and characterization of two thermostable xylanases from Paenibacillus sp. DG- 22. J. Microbiol. Biotechnol. 14: 1014-1021
- Marmur, J. 1961. A procedure for the isolation of deoxyribonucleic acid from microorganisms. J. Mol. Biol. 3: 208-218 https://doi.org/10.1016/S0022-2836(61)80047-8
-
Miyazaki, K., H. Miyamoto, D. K. Mercer, T. Hirase, J. C. Martin, Y. Kojima, and H. J. Flint. 2003. Involvement of the multidomain regulatory protein XynR in positive control of xylanase gene expression in the ruminal anaerobe Prevotella bryantii
$B_{1}4$ . J. Bacteriol. 185: 2219-2226 https://doi.org/10.1128/JB.185.7.2219-2226.2003 - Nossal, N. G. and L. E. Heppel. 1966. The release of enzymes by osmotic shock from Escherichia coli in exponential phase. J. Biol. Chem. 241: 3055-3062
- Paice, M. G., R. Bourbonnais, M. Desrochers, L. Jurasek, and M. Yaguchi. 1986. A xylanase gene from Bacillus subtilis: Nucleotide sequence and comparison with B. pumilus gene. Arch. Microbiol. 144: 201-206 https://doi.org/10.1007/BF00410947
- Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular Cloning: A Laboratory Manual, 2nd Ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, U.S.A
- Sanger, F., S. Nicklen, and A. R. Coulson. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74: 5463-5467
- Sapag, A., J. Wouters, C. Lambert, P. de. Ioannes, J. Eyzaguirre, and E. Depiereux. 2002. The endoxylanases from family 11: Computer analysis of protein sequences reveals important structural and phylogenetic relationships. J. Biotechnol. 95: 109-131 https://doi.org/10.1016/S0168-1656(02)00002-0
- Subramaniyan, S. and P. Prema. 2002. Biotechnology of microbial xylanases: Enzymology, molecular biology, and application. Crit. Rev. Biotechnol. 22: 33-64 https://doi.org/10.1080/07388550290789450
- Takami, H., K. Nakasone, Y. Takaki, G. Maeno, R. Sasaki, N. Masui, F. Fuji, C. Hirama, Y. Nakamura, N. Ogasawara, S. Kuhara, and K. Horikoshi. 2000. Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis. Nucleic Acid Res. 28: 4317-4331 https://doi.org/10.1093/nar/28.21.4317
-
Trrnen, A. and J. Rouvinen. 1997. Structural and functional properties of low molecular weight endo-1,4-
$\beta$ -xylanases. J. Biotechnol. 57: 137-149 https://doi.org/10.1016/S0168-1656(97)00095-3 - Viikari, L., A. J. Kantelinen, G. Sundquist, and M. Linko. 1994. Xylanases in bleaching: From an idea to industry. FEMS Microbiol. Rev. 13: 335-350 https://doi.org/10.1111/j.1574-6976.1994.tb00053.x
-
Virupakshi, S., K. G. Babu, and G. R. Naik. 2005. Partial purification and characterization of thermostable alkaline
$\beta$ -mannanase from Bacillus sp. JB-99 suitable for pulp bleaching. J. Microbiol. Biotechnol. 15: 689-693 - Ward, O. P. and M. Moo-Young. 1989. Enzymatic degradation of cell wall and related plant polysaccharides. Crit. Rev. Biotechnol. 8: 237-274 https://doi.org/10.3109/07388558909148194
- Wood, P. J., J. D. Erfle, and R. M. Teather. 1988. Use of complex formation between Congo red and polysaccharide in detection and assay of polysaccharide hydrolases. Methods Enzymol. 160: 59-74 https://doi.org/10.1016/0076-6879(88)60107-8
- Yang, R. C. A., C. R. Mackenzie, and S. A. Narang. 1988. Nucleotide sequence of a Bacillus circulans xylanase gene. Nucleic Acids Res. 16: 7187 https://doi.org/10.1093/nar/16.14.7187