Characterization of Human Foamy Virus Integrase Mutant

인간 포미바이러스 인테그라제 돌연변이의 특성

  • Kang Seung Yi (Department of Biotechnology and BET Research Institute, Chung-Ang University) ;
  • Oh Soo A (Department of Biotechnology and BET Research Institute, Chung-Ang University) ;
  • Lee Hak Sung (Department of Biotechnology and BET Research Institute, Chung-Ang University) ;
  • Han Sung Tai (Department of Biotechnology and BET Research Institute, Chung-Ang University) ;
  • Shin Cha-Gyun (Department of Biotechnology and BET Research Institute, Chung-Ang University)
  • 강승이 (중앙대학교 산업과학대학 생명공학과) ;
  • 오수아 (중앙대학교 산업과학대학 생명공학과) ;
  • 이학성 (중앙대학교 산업과학대학 생명공학과) ;
  • 한성태 (중앙대학교 산업과학대학 생명공학과) ;
  • 신차균 (중앙대학교 생명환경연구원)
  • Published : 2005.06.01

Abstract

Human foamy virus (HFV) integrase mediates integration of viral c-DNA into cellular DNA. In this process, HFV integrase recognizes its own viral DNA specifically and catalyzes insertion of viral c-DNA. In order to study catalytic domains and residues, three deletion mutants and two point mutants of HFV integrase were constructed and analyzed with respect to enzymatic activities. The C-terminal deletion mutant showed decreased enzymatic activities while the N-terminal deletion mutant lost the activities completely, indicating that the N-terminal domain is more important than the C-terminal domain in enzymatic reaction. The point mutants, in which an aspartic acid at the 164th position or a glutamic acid at the 200th position of the HFV integrase protein was changed to an alanine, lost the enzymatic activities completely. However, they were well complemented with other defective deletion mutants to recover enzymatic activities partially. Therefore, these results suggest that the aspartic acid and glutamic acid at the respective 164th and 200th positions are catalytic residues for enzymatic reaction.

Keywords

References

  1. Malmquist, W. A., van der Maaten, M. J. and Boothe, A. D. : Isolation, immunodiffusion, immunofluorescence, and electromicroscopy of a. syncytial virus of lymphosarcomatous and apparently normal cattle. Cancer Res. 29, 188 (1969)
  2. Riggs, J. L., Oshiro, L. S., Taylor, D. O. N. and Lennette, E. H. : Syncytium-forming agents isolated from domestic cats. Nature (London) 222, 1190 (1969) https://doi.org/10.1038/2221190a0
  3. Hooks,J.J. and Gibbs, C.J. : The foamy viruses. Bacteriological Reviews 39, 169 (1975)
  4. Flugel, R. M. : Spumaviruses: a group of complex retroviruses. J. Acquired Immune Defic. Syndr. 4, 739 (1991)
  5. Achong, B. G., Mansell, P. W. A., Epstein, M. A. and Clifford, P. : An unusual virus from a human nasopharyngeal carcinoma. J. Natl. Cancer Inst. 46, 299 (1971)
  6. Prince, A. M., Williams, B. A. A., Huima, T., Bardina, L. and Brotman, B. : Isolation of a virus from chimpanzee liver cell cultures inoculated with sera containing the agent of non-A, non-B hepatitis. Lancet 11, 1071 (1984)
  7. Coffin, J. M. : Replication of retroviridae, In B. N. Fields (ed.) Virology Raven Press, New York, p1437 (1990)
  8. Goff, S. P. : Genetics of retroviral integration. Annu. Rev. Genet. 26, 527, (1992) https://doi.org/10.1146/annurev.ge.26.120192.002523
  9. Bushman, F D. and Craigie, R. : Activities of human immunodeficiency virus (HN) integration protein in vitro: specific cleavage and integration of HIV DNA. Proc. Natl. Acad. Sci. USA 88, 1339 (1991)
  10. Craigie, R., Fugiwara, T. and Bushman, F. : The in protein of moloney murine leukemia virus processes the viral DNA ends and accomplishes their integration in vitro. Cell 62, 829 (1990) https://doi.org/10.1016/0092-8674(90)90126-Y
  11. Engelman, A., Mizuuchi, K. and Craigie, R. : HIV-1 DNA integration: mechanism of viral DNA cleavage and DNA strand transfer. Cell 67, 1211 (1991) https://doi.org/10.1016/0092-8674(91)90297-C
  12. Chow, S. A., Vincent, K., Ellison, V. and Brown, P. O. : Reversal of integration and DNA splicing mediated by integrase of human immunodeficiency virus. Science 255, 723 (1992) https://doi.org/10.1126/science.1738845
  13. Engelman, A., Bushman, F. D. and Craigie, R. : Identification of discrete functional domains of HIV-l integrase and their organization within an active multimeric complex. EMBO J. 66, 3269 (1993)
  14. van Gent, D., Vink, C., Groeneger, A. M. and Plasterk, R. H. K. : Complementation between HIV integrase proteins mutated in different domains. EMBO J. 12, 3261 (1993)
  15. Pahl, A. and Flugel, R. M. ; Endonucleolytic cleavages and DNA-joining activities of the integration protein of human foamy virus. J. Viol. 67, 5426 (1993)
  16. Pahl, A. and Flugel, R. M. ; Characterization of the human spuma Retrovirus integrase by site-directed nutagenesis, complementation analysis, and by swapping the zinc finger domain of HIV-1. J. Biol. Chem. 270, 2957 (1995) https://doi.org/10.1074/jbc.270.7.2957
  17. Kang, S. Y., Oh, S. A., Lee, H. S., Han, S. T., Seo, J.-W. and Shin, C.-G. : Biochemical characterization of human foamy virus integrase. Yakhak Hoeji 48, 13 (2004)
  18. Horton, R. M., Ho, S. N., Pullen, J. K., Hunt, H. D., Cai, Z. and Pease, L. R. : Gene splicing by overlap extension. Methods in Enzymology 217, 270 (1993) https://doi.org/10.1016/0076-6879(93)17067-F
  19. Oh, J.-W., Oh, Y.-T., Kim, D. J. and Shin, C.-G. : Characterization of human immunodeficiency virus type 1 integrase mutants expressed in Escherichia coli. Mol. Cells 7, 688 (1997)
  20. Oh, Y.-T. and Shin, C.-G. : Comparison of enzymatic activities of the HIV-1 and HFV integrases to their U5 LTR substrates. Bio. Mol. Biol. Int. 47, 612 (1999)
  21. Skalka, A. M. : Integrative recombination of retroviral DNA. In Genetic recombination, R. Kucherlapati and R. Smith, eds., Washington, DC, p701 (1988)
  22. Varmus, H. E. and Brown, P. : Retroviruses. In Mobile DNA, D. Berg and M. Howe, eds. Washington, DC, p53 (1989)
  23. Appa, R. S., Shin, C.-G., Lee, P. and Chow, S. A. : Role of the nonspecific DNA-binding region and helices within the core domain of retroviral integrase in selecting target DNA sites for integration. J. Biol. Chem. 276, 45848 (2001) https://doi.org/10.1074/jbc.M107365200
  24. Jones, K. S., Coleman, J., Merkel, G. W., Laue, T. M. and Skalka, A. M. : Retroviral integrase functions as a multimer and can turn over catalytically. J. Biol. Chem. 267, 16037 (1992)