DOI QR코드

DOI QR Code

Molecular Analysis of Exophiala Species Using Molecular Markers

  • Chee, Hee-Youn (Division of Biological Sciences, Medical School, Konyang University) ;
  • Kim, Yoon-Kyoung (Division of Biological Sciences, Medical School, Konyang University)
  • Published : 2002.03.31

Abstract

Genetic relatedness of medically important Exophiala species such as E. dermatitidis, E. mansonii, and three E. jeanselmei varieties: jeanselmei, lecanii-corni, and heteromorpha was examined using PCR-RFLP(restriction fragment length polymorphism) of ribosomal DNA, M-13, $(GTG)_5$ and nucleotide sequences of ribosomal ITS(internal transcribed space) II regions. Three E. jeanselmei varieties showing distinct band patterns for each DNA markers as well as different nucleotide sequences of ribosomal ITS II regions could be considered as a separate species. E. dermatitidis and E. mansonii demonstrated the identical band patterns of RFLP of ribosomal DNA, M-13, and $(GTG)_5$ markers. However, nucleotides sequences of ribosomal ITS II region were different between these two species.

Keywords

References

  1. Freeman, S. and Rodriguez, R. J. 1995. Differentiation of Colletotrichum species responsible for anthracnose of strawbeny by arbitrarily primed PCR. Mycol. Res. 99: 501-504 https://doi.org/10.1016/S0953-7562(09)80653-9
  2. Hoog, G. S. de. 1997. Rhinocladiella and allied genera. Studies in Mycology 15: 1-140
  3. Hoog, G. S. de and McGinnis, M. R. 1987. Ascomycetons black yeasts. Studies in Mycology 30: 187-199
  4. Iwatsu, T and Udagawa, S. I. 1990. Exophiala jeanselmei var. castellanii a new combination for Eoxphiala castellanii. Mycotaxon 37: 291-292
  5. Kawasaki, M., Ishizaki, H., Nishimura, K. and Miyaji, M. 1990. Mitochondrial DNA analysis of Exophiala jeanselmei and Exophiala dermatitidis. Mycopathologia 110: 107-112 https://doi.org/10.1007/BF00446999
  6. Kawasaki, M., Ishizaki, H., Matsumoto, T, Matsuda, T., Nishimura, K. and Miyaji, M. 1999. Mitocondrial DNA analysis of Exophiala jeanselmei var. lecanii-corni and Exophiala castellanii. Mycopathologia. 146: 75-77
  7. Kwan, H. S., Chiu, S. W, Pang, K. M. and Cheng, S. C. 1992. Strain typing in Lentinula edodes by polymerase chain reaction. Exp. Mycol. 16: 163-166 https://doi.org/10.1016/0147-5975(92)90023-K
  8. Matsuda, M., Nakn, W., Tajima, S., Harada, T, Nishikawa, T., Kaufman, L. and Standard, P. 1989. Deoxyribonucleic acid hybridization studies of Exophiala ermatitidis and Exophiala jeanselmei. Microbiological. Immunol. 33: 631-639
  9. Stenlid, J., Karlsson, J. O. and Hogberg, N. 1994. Intraspecific genetic variation in Heterobasidion anosum revealed by amplification of minisatellite DNA. Mycol. Res. 98: 57-63 https://doi.org/10.1016/S0953-7562(09)80337-7
  10. Uijthof, J. M. J. 1996. Relationships within the black yeast genus Exophiala based on ITSI sequences. Mycol. Res. 100: 1265-1271 https://doi.org/10.1016/S0953-7562(96)80192-4
  11. Uijthof, J. M. J. and Hoog, G. S. de. 1995. PCR-ribotyping of type isolates of currently accepted Exophiala and Phaecoccomyces sp. Antonie van Leeuwenhoek. 68: 35-42 https://doi.org/10.1007/BF00873290
  12. Uijthof, J. M. J.,Hoog, G. S., Cock, A. W A. M. de, Takeo, K. and Nishimura, K. 1994. Pathology of strains of the black yeast Exophiala(Wangiella) dermatitidis: an evaluation based on PCR. Mycoses 37: 235-242

Cited by

  1. vol.31, pp.1, 2003, https://doi.org/10.4489/MYCO.2003.31.1.019
  2. A molecular approach for the rapid, selective and sensitive detection of Exophiala jeanselmei in environmental samples: development and performance assessment of a real-time PCR assay vol.100, pp.3, 2016, https://doi.org/10.1007/s00253-015-7175-z