Gamma Radiation Induced Mutational Spectrum of Laccase Gene in Pleurotus ostreatus

  • Lee, Young-Keun (Radiation Application Division, Korea Atomie Energy Research Institute) ;
  • Chang, Hwa-Hyoung (Radiation Application Division, Korea Atomie Energy Research Institute) ;
  • Kim, Jae-Sung (Radiation Application Division, Korea Atomie Energy Research Institute) ;
  • Jang, Yu-Sin (Radiation Application Division, Korea Atomie Energy Research Institute) ;
  • Lee, Ho-Yong (Dept. of Biological Science, Sang Ji Univ.)
  • Published : 2002.12.01

Abstract

To investigate the mutational spectrum of laccase (Lac) genes (lac -A and lac -B) involved in degrading lignin which is the recalcitrant cell wall polymer, the genes of the Pleurotus ostreatus mutants induced by gamma ray radiation were amplified by PCR and were cloned. All partial lac-A genes of 4 mutants (PO-6, -7, -14 and -15) consisted of 1763 base pairs due to the deletion of two bases (491-nt and 492-nt) and addition of one base (875-nt) in 1764 base pairs of lac -A gene of PO-1. Totally 36 mutational hot spots were detected and 32 positions were mutated in all of those 4 mutants simultaneously. These mutations were predominantly A : T -> G : C transitions (40%). Putative amino acid sequences of lac -A genes of mutants have one simultaneous mutated residue (from Thr-44 to Ala-44). The 1764 bp of partial lac -B gene was cloned only in PO -5 mutant and contained 19 mutated bases. These mutations were predominantly G : C->A : T transitions (45%). Lac-B protein of PO-5 has two mutated residues of Glu-290 and His-363 from Ala-290 and Phe-363, respectively. The hyper-mutational positions were concentrated in specific regions of between 50-nt and 900-nt in lac genes. These results suggested that the mutational hotspots responded to gamma radiation could be in some genes, at least lac -A and lac -B of p. ostreatus.

Keywords

References

  1. Biochim.Biophys.Acta. v.1251 Structures of genomic and molementary DNAs coding for pleurotus ostreatus manganese(Ⅱ)peroxidase Asada Y.;A.Watanabe;T.Irie;T.Nakayama;M.Kuwahara https://doi.org/10.1016/0167-4838(95)00102-Z
  2. Arch.Microbiol. v.153 Nitrogen-deregulated mutants of Phanerochaete chrysosporium0a lignin-degrading basidiomycete Boominathan K.;S.Dass;TA Randall;CA Reddy https://doi.org/10.1007/BF00245259
  3. Biochem.J. v.341 Protein and gene structure of a blue laccase from Pleurotus ostreatus Giardina P.;G.Palmieri;A.Scaloni;B.Fontanella;V.Faraco;G.Cennamo;G.Sannia https://doi.org/10.1042/0264-6021:3410655
  4. Appl.Envron.Microbiol. v.61 cloning and sequencing of a lacase gene from lignin-degrading basidiomycete Pleurotus ostreatus Giardina P.;R.Cannio;L.Martirani;L.Marzullo;G.Palmieri;G.Sannia
  5. Carcinogenesis v.16 Mutational spectrum of X-ray- induced TK-human cell mutants Giver CR;SL Nelson;MY Cha;P Pongsaensook;AJ Grosovsky https://doi.org/10.1093/carcin/16.2.267
  6. Biotechniques v.16 A simplified method for the preparation of fungal genomic DNA for PCR and RAPD analysis Graham GC
  7. Manual on Radiation Dosimetry Holm MW;RJ Berry
  8. Mutagenesis v.13 Mutation studies in Iacl transgenic mice after exposure to radiation or cyclophosphamide. Hoyes KP;PJ Wadeson;HL Sharma;JH Hendry;ID Morris https://doi.org/10.1093/mutage/13.6.607
  9. Progr.Nucleic Acid Res.Mol.Biol. v.30 Chemical changes induced in DNA by ionizing radiation Hutchinson F.
  10. Radiat.Phys.Chem. v.57 Lignocellulolytic mutants of Pleurotus ostreatus induced by gamma - ray radiation and their genetic similarities Lee Y.K.;H.H.Chang;J.S.Kim;JK Kim;K.S.Lee https://doi.org/10.1016/S0969-806X(99)00310-2
  11. Fungal Genetics Biol. v.27 Biodegradaiton of lignin by white rot fungi Leonowicz A.;A.Matuszewska;J.Luterek;D.Ziegenhagen;M.Wojtas Wasilewska;N.S.cho;M.Hofricher;J.Rogalski https://doi.org/10.1006/fgbi.1999.1150
  12. J.Bacteriol. v.162 Phenotypic classes of phenoloxidase-negative mutants of the lignin-degrading fungus Phanerochaete chrysosporiu Liwicki R.;A.Paterson;MJ MacDonald;P.Broda
  13. Radiat Res. v.74 A model for radiation damage in cells by direct effect and by indirect effect : a radiation chemistry approach Michaels HB;JW Hunt https://doi.org/10.2307/3574754
  14. Mutat.Res. v.227 DNA sequence determination of gamma - radiation-induced mutations of the hamsteraprt locus Miles C.;M.Meuth https://doi.org/10.1016/0165-7992(89)90004-3
  15. Carcinogenesis v.15 Spectrum of X-ray-induced mutations in the human hprt gene Nelson SL;CR Giver;AJ Grosovsky https://doi.org/10.1093/carcin/15.3.495
  16. Mutat.Res. v.309 DNA sequence analysis of gamma - radiation (anoxic)-induced ad spontaneous Iacld mutations in Escherichi coli K-12 Sargentini NJ;KC Smith https://doi.org/10.1016/0027-5107(94)90088-4
  17. Mutat.Res. v.311 DNA sequence analysis of spontaneous and gamma-radiation(anoxic)-induced Iacld mutations in Eschericaia coli umuC122:Tn5:differential requirement for umuC at G:C vs.A:T sites and for the production of transversions vs.transitions Sargentini NJ;KC Smith https://doi.org/10.1016/0027-5107(94)90175-9
  18. The Chemical Basis of Radiation Biology Sonntag Von C.
  19. Mutat.Res. v.160 The nuture of mutants induced by ionizing radiation in cultured hamster cells.Ⅲ.Molecular characterization of HPRT-deficient mutations induced by gamma-rays or alpha-particles showing that the majority have deletions of all or part of the hprt gene Thacker J. https://doi.org/10.1016/0027-5107(86)90137-5
  20. C R Acad.Sci.Ⅲ v.322 Repair of ioninzing radiation damage in mammalian cells. Alternative pathways and their fidelity Thacker J. https://doi.org/10.1016/S0764-4469(99)80030-4
  21. Genetics v.118 changes in DNA base sequence in duced by gamma ray mutagenesis of lambda phage and prophage Tindall KR;J.Stein;F.Hutchinson
  22. Mutat.Res. v.408 Influenece of the UV-activated SOS response on the gamma radiation induced mutation spectrum in the lacI gene Wijker CA;MVM Lagleur https://doi.org/10.1016/S0921-8777(98)00034-2
  23. Mutat.Res. v.349 Gamma radiation induced mutation specturm in the episomal Iocl gene of Escherichia coli under oxic conditions Wijker CA;MVM Lafleur;Van h Steeg;GR Mohn;J.Retel
  24. Mutat. Res. v.403 Mutation spectrum in the Ical gene, induced by gamma radiation in aqueous solution under oxic conditions Wijker CA;NM Wjentjes;MVM Lafleur https://doi.org/10.1016/S0027-5107(98)00072-4
  25. Mutat.Res. v.307 Radiation induced point mutations, deletions and microuclei in Iaci transgenic mice Wineger RA;LH Lutze;JD Hamer;KG O'Loughlin;JC Mirsalis https://doi.org/10.1016/0027-5107(94)90258-5
  26. Appl.Environ.Microbiol. v.65 Characterization, molecular cloning, and differential expression analysis of laccase genes from the edible mushroom Lentinula edodes Zhao J.;JS Kwan
  27. Genetics v.120 Production and characterization of radiation - sensitive meiotic mutants of Coprinus cinereus Zolan ME;CJ Tremel;PJ Pukkila