Effect of His192 Mutation on the Activity of Alginate Lyase A1-III from Sphingomonas Species A1

  • Yoon, Hye-Jin (Department of Chemistry, College of Natural Science, Seoul National University) ;
  • Choi, Yong-Jin (Graduate School of Biotechnology, Korea University) ;
  • Osamu Miyake (Research Institute for Food Science, Kyoto University) ;
  • Wataru Hashimoto (Research Institute for Food Science, Kyoto University) ;
  • Kousaku Murata (Research Institute for Food Science, Kyoto University) ;
  • Bunzo Mikami (Research Institute for Food Science, Kyoto University)
  • Published : 2001.02.01

Abstract

The alginate lyase A1-III gene of Sphingomonas species A1 is composed of 1,077 nucleotides, encoding a protein (359 amino acids) with a molecular mass of 40,322 Da. Recombinant A1-III expressed in Escherichia coli exhibited the same full enzymatic activity as native A1-III. In order to identify the critical residue for activity, a site-directed mutation was introduced into the A1-III gene (H192A, His192->Ala). Recombinant A1-III (H192A) exhibited a significant decrease in enzyme activity (one-thirty thousandth of that of A1-III), without any conformational change, as detected by the CD spectra in the far UV region. Also, the chemical modification of wild-type A1-III with methyl 4-nitro benzene sulfonate resulted in a 40% decrease from the initial activity, whereas the same modification of A1-III (H192A) produced no change in the activity. The role of His192 on the catalytic process was also explored based on a model of A1-III docked with mannuronic acid into the active site.

Keywords

References

  1. Anal. Biochem. v.7 The rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding Bradford, M. M.
  2. FEBS Letters v.212 Alginate-modifying enzymes. A proposed unified mechanism of action for the lyases and epimerases Gacesa, P.
  3. Connect. Tissue Res. v.3 Studies on the mechanism of hyaluronate lyase action Greiling, H.;H. W. Stuhlsatz;T. Eberhard;A. Eberhard
  4. Biochemistry v.3 Information content in the circular dichroism of proteins Hennessey, J. P.;W. C. Johnson
  5. J. Ferment. Bioeng. v.78 On the self-processing of bacterial alginate lyase Hisano, T.;M. Nishimura;T. Yamashita;K. Sakaguchi;K. Murata
  6. J. Appl. Crystallog. v.24 MOLSCRIPT: A program to produce both detailed and schematic plots of protein structure Kraulis, P. J.
  7. Nature v.227 Cleavage of structural proteins during the assembly of the head of bacteriophage T4 Laemmli, U. K.
  8. Appl. Biochem. Biotechnol. v.12 Polysaccharide lyases Linhardt, R. J.;P. M. Galliher;C. L. Cooney
  9. Arch. Biochem. Biophys. v.10 Identification of a second active site residue in Escherichia coli L-threonine dehydrogenase: methylation of histidine-90 with methyl p-nitrobenzene sulfonate Marcus, J. P.;E. F. Dekker
  10. J. Ferment. Bioeng. v.76 Baterial alginate lyase: Enzymology, genetics and application Murata, K.;T. Inose;T. Hisano;S. Abe;Y. Yonemoto;T. Yamashita;M. Takagi;K. Sakaguchi;A. Kimura;T. Imanaka
  11. J. Mol. Biol. v.299 Mechanism of hyaluronan binding and degradation: Structure of Streptococcus pneumoniae hyaluronate lyase in complex with hyaluronic acid disaccharide at 1.7 A resolution Ponnuraj, K.;M. J. Jedrzejas
  12. Molecular Cloning. A Laboratory Manual, 2nd ed. Sambrook, F.;S. Nicklen;T. Maniatis
  13. Proc. Natl. Acad. Sci. USA v.74 DNA sequencing with chain-terminating inhibitors Sanger, F.;S. Nicklen;A. R. Coulson
  14. J. Ferment. Bioeng. v.72 Bacterial alginate lyase gene: Characterization of alginate lyase-producing bacteria and purification of the enzyme Yonemoto, Y.;K. Murata;A. Kimura;H. Yamaguchi;K. Okayama
  15. J. Ferment. Bioeng. v.75 Bacterial alginate lyase gene: Nucleotide sequence and molecular route for the generation of alginate lyase species Yonemoto, Y.;H. Tanaka;T. Hisano;K. Sakaguchi;S. Abe;T. Yamashita;A. Kimura;K. Murata
  16. J. Mol. Biol. v.290 Crystal structure of alginate lyase A1-Ⅲ from Sphingomonas species A1 at. 78 A resolution Yoon, H. J.;B. Mikami;W. Hashimoto;K. Murata
  17. Protein Expres Purif. v.19 Overexpression of Sphingomonas sp. A1 alginate lyases Yoon, H. J.;W. Hashimoto;O. Miyake;M. Okamoto;B. Mikami;K. Murata