Cloning and Sequence Analysis of the nodD1 Gene from Bradyrhizobium sp.(Cassia) CN9135

Bradyrhizobium sp.(Cassia) CN9135의 nodD1 유전자의 크로닝과 염기서열 분석

  • 최순용 (한남대학교 이과대학 미생물학과) ;
  • 고상균 (대전대학교 이과대학 생명과학부)
  • Published : 2000.12.01

Abstract

A 1.7-kb fragment containing the nodD1 genes of Bradyrhizobium sp. (Cassia) CN9135 was amplified by PCR with primers based on B. japonicum USDA110. This fragment was cloned and sequenced. Analysis of the sequence showed open reading frames highly homologous to nodD1 from other bradyrhizobial sources. The sequence showed higher homology to nodD1 gene of B. elkanii than to those from b. japonicum. Our results suggest that Bradyrhizobium sp. (Cassia) CN9135 may be more closely related to B. elkanii than to B. japonicum.

차풀(Cassia nomame)의 뿌리혹 공생세균인 Bradyrhizobium sp.(Cassia) CN9135의 nodD1 유전자를 중합효소 연쇄반응을 통해 크로닝하여 그 염기서열을 조사하였다. 염기서열로부터 유추된 NodD1 단백질은 Bradyrhizobium elkanii와 가장 높은 95%의 상동성을 나타내었다. 뿐만 아니라 nodD2 사이의 intergenic space 부위의 염기서열도 B. japonicum을 포함하는 다른 bradyrhizobia와는 상동성이 거의 없었으나 B. elkanii와는 88%의 높은 상동성을 나타내었다. 우리의 실험 결과는 Bradyrhizobium sp.(Cassia)가 B. elkanii와 매우 근연한 관계임을 보여 주고 있다.

Keywords

References

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