Investigation of Thionin Interacting With Polynucleotides by Satellite Holes

  • Yang, Yih-Pey (Institute of Atomic and Molecular Sciences, Academia Sinica) ;
  • Kevin C. Weng (Institute of Atomic and Molecular Sciences, Academia Sinica) ;
  • Yan, Cheng-Sheng (Institute of Atomic and Molecular Sciences, Academia Sinica, Departemnt of Chemistry, National Taiwan University) ;
  • Chiang, Chien-Chih (Institute of Atomic and Molecular Sciences, Academia Sinica, Departemnt of Chemistry, National Taiwan University) ;
  • Chang, Ta-Chau (Institute of Atomic and Molecular Sciences, Academia Sinica, Departemnt of Chemistry, National Taiwan University)
  • Published : 1999.05.01

Abstract

We have introduced the nonresonant holes in the satellite hole spectrum to examine the interaction of two tautomers of thionin to various polynucleotides, including [d(GC)7]2 , [d(AT)7]2 and calf thymus. The saturated depths of nonresonant holes are much reduced upon interacting with [d(GC)7]2 and calf thymus than with [d(AT)7]2 , implying that the binding affinity of thionin to [d(GC)7]2 and calf thymus is stronger than [d(AT)7]2 . In addition, the less perturbation on the exocyclic amino group of the amino -form of thionin upon interacting with [d(AT)7]2 suggests that a direct hydrogen bond formed between the amino group of thionin and the phosphate of nucleic acids is unlikely.

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References

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