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Molecular Dynamics Simulation Study on Segmental Motion in Liquid Normal Heptadecane

  • Published : 1998.11.20

Abstract

We present results of molecular dynamic (MD) simulations for the segmental motion of liquid n-heptadecane in order to investigate conformational transitions from one rotational isomeric state to another. The behavior of the hazard plots for n-heptadecane obtained from our MD simulations are compared with that for polymer of Brownian dynamics (BD) study. The transition rate at the ending dihedrals of the n-heptadecane chain is much higher than that at the central dihedrals. In the study of correlation between transitions of neighboring dihedrals, the large value of c2 implies that some 30% of the transitions of the second neighbors can be regarded as following transitions two bonds away in a correlated fashion. Finally the analysis of multiple transitions and the number of times occurred in the initial 0.005 ns are discussed.

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References

  1. J. Chem. Phys. v.72 Skolnick, J.;Helfand, E.
  2. J. Chem. Phys. v.77 Helfand, E.;Skolnick, J.
  3. Macromolecules v.13 Helfand, E.;Wasserman, E. R.;Weber, T. A.
  4. Science v.226 Helfand, E.
  5. J. Chem. Phys. v.89 Pastor, R. W.;Venable, R. M.;Karplus, M.
  6. J. Am. Chem. Soc. v.103 Levy, R. M.LKarplus, M.;Wolynes, P. G.
  7. J. Am. Chem. Phys. v.89 Pastor, R. W.;Venable, R. M.;Karplus, M.;Szabo, A.
  8. J. Polym. Sci. v.57 Schatzki, T. F.
  9. J. Chim. Phys. v.66 Monnerie, L.;Geny, F.
  10. Bull. Kor. Chem. Soc. v.19 Lee, S. H.;Kim, H. S.
  11. Comput. Phys. Commun. v.62 Chynoweth, S.;Klomp, U. C.;Scales, L. E.
  12. J. Chem. Phys. v.95 Chynoweth, S.;Klomp, U. C.;Michopoulos, Y.
  13. J. Chem. Soc., Faraday Trans. v.88 Berker, A.;Chynoweth, S.;Klomp, U. C.;Michopoulos, Y.
  14. Phys. Rev. v.A28 Evans, D. J.;Hoover, W. G.;Failor, B. H.;Moran, B.;Ladd, A. J. C.
  15. Chem. Phys. Lett. v.129 Simmons, A. D.;Cummings, P. T.
  16. Discuss. Faraday Soc. v.66 Ryckaert, J. P.;Bellemans, A.
  17. J. Chem. Soc., Perkin Trans. v.2 White, D. N. J.;Boville, M. J.
  18. Numerical Initial Value Problems in Ordinary Differential Equation Gear, C. W.
  19. ORTEP. Report ORNL-3794 Johnson, C. K.