Serratia marcescens에서 cAMP receptor protein(CRP) 유전자의 클로닝 해석

Analysis and cloning of cAMP receptor protein(CRp) gene in Serratia marcescens

  • 유주순 (동아대학교 생명자원과학부) ;
  • 김혜선 (동아대학교 생명자원과학부) ;
  • 문종환 (동아대학교 생명자원과학부) ;
  • 정수열 (동주대학 식영과) ;
  • 최용락 (동아대학교 생명자원과학부)
  • 발행 : 1998.06.01

초록

전사조절인자로서 잘 알려져 있는 cAMP receptor protein(CRP)은 cAMP와 DNA에 결합하는 특별한 활성을 가지고 있으며, cAMP-CRP complex를 형성하여 수많은 유전자의 발현조절에 관여한다. 이러한 측면에서 cAMP-CRP의 조절은 어떤 면에서 총체적 조절체계라고까지 한다.본 연구는 Serratia 균주에서 crp 유전자의 분자적 특성 및 cAMP에 의한 발현조절을 받는 분자기구를 해석하고자 유전자를 클로닝하고 발현을 확인하였다. MacConkey 배지에서 maltose를 탄소원으로 충분히 이용하지 못하는 대장균 TP2139(${\Delta}crp$,${\Delta}lac$를 숙주로 이용하고, 염색체 DNA를 library로 작성하여 얻은 형질전환체 약 일만개의 콜로니에서 red colony를 나타내는 5종류의 양성 클론을 얻었다. 이들 클론을 Southern 방법으로 확인한 결과 3kh의 단편을 가진 pCKB12클론이 crp유전자를 coding하고 있음을 확인하였다. glpD-lacZ 융합 plasmid인 pLDC6의 BamHI부위에 pCKB12의 3kb 단편을 삽입시킨 재조합 plasmid pLDC6-Scrp를 작성하여, 클로닝된 Serratia의 crp유전자가 대장균에서 유전자 전사조절에 미치는 영향을 확인한 결과 cAMP-CRP 복합체 형성에 의한 전사조절 기능이 확인되어졌다.

One of the better-characterized transcription factor of E. coli is the cAMP receptor protein(CRP) and the CRP binds cAMP and DNA. The cAMP-CRP complex is involved in regulation of many genes at bacteria. The cAMP-CRP regulatory element represents, in some respects, a global regulatory network. The aim of this work was to study the structure and the mechanisms controlling the expression of CRP in Serratia marcescens. We have been get 5 different clones from Serratia which stimulated the cells to use maltose as a sole carbon source in E. coli TP2139. The crp gene clone, pCKB12, was confirmed by Southern hybridization with E. coli crp gene. The location of the crp gene was determined by construction subclones carrying various portions of pCKB12. To investigate the potential role of CRP in E. coli, lacZ fused plasmids were constructed and investigated the ${\beta}$-galactosidase activity of the fused plasmid. The Serratiamarcescens cAMP receptor protein can substitute the E. coli CRP in transcriptional activation at the lacZ gene. These results suggest that Serratia marcescens cAMP receptor protein complex functions to regulate several promoters in E. coli.

키워드

참고문헌

  1. Nucleic Acids Res. v.10 Molecular cloning and sequencing of the gene for E. coli cAMP receptor protein Aiba, H.;Fujimoto, S.;Ozaki, N.
  2. J. Bacterilogy. v.176 no.24 The ufr gene product, required for Pseudomonas aeruginosa exotoxin A and protease production, belons to the cyclic AMP receptor protein family West, S. E.;Sample, A. K.;Runyen-Janecky, L. Y.
  3. J. Baeteriol. v.167 no.2 crp genes of Shigella flexneri, Salmonella typhimurium, and Escherichia coli Cossart, P.;Croismen, E. A.;Serre, M. C.;Casadaban, M. J.;Gicquel-Sanzey, B.
  4. Proc. Natl. Acad. Sci. v.89 no.5 The gene encoding cAMP receptor protein is required for competence development in Hamophilus influenza Rd Chandler M. S.
  5. J. Bacteriol. v.174 no.16 DNA binding specificity and sequence of Xanthomonas campestris catabolite gene activator protein-like protein Dong, Q.;Ebright, R. H.
  6. J. Mol. Biol. v.198 no.2 Structure of a complex of catabolite gene activator protein and cyclic AMP refined at 2.5A resolution Weber, I. T.;Steiz, T. A.
  7. J. Bacteriol. v.173 no.20 Klebsiella aerogenes catabolite gene activator protein and the gene encoding it(crp) Osuna, R.;Bender, R. A.
  8. Science v.224 Cyclic AMP receptor protein : role in transcriptional activation de Crombrugghe, B.;Bushy, S.;Buc, H.
  9. Nature v.290 Sturcture of catabolite gene activator protein at 2.9A resolution suggests binding to left-handed B-DNA Mckay, D. B.;Steitz, T. A.
  10. Adv. Cyclic Nucleotide Res. v.15 Role of cyclic AMP in bacteria zUllmann, A.;Danchin, A.
  11. Gene v.68 Transcription from the Escherichia coli melR promoter is dependent on the cyclic AMP receptor protein Webster, C.;Gaston, K.;Budsy, S.
  12. Cell v.32 Autoregulation of the Escherichia coli crp gene : crp is transcriptional receptor of its own gene Aiba, H.
  13. Proc. Natl. Acad. Sci. v.94 Cyclic AMP and receptor protein negatively regulate the coordinate expression of cholera toxin and toxin-coregulated pilus in Vibrio cholerae Karen, S.;Ronald, K. T.
  14. Proc. Natl. Acad. Sci. v.94 cAMP receptor protein- cAMP plays a crucial role in glucose-lactose diauxie by activating the major glucose transporter gene in Escherichia Kimata, K.;Takahashi, H.;Inada, T.;Postma, P.;Aiba, H.
  15. J. Gen. Appl. Microbiol. v.41 Transcription of sfs 4, one of the gentic elements related to CRP -dependent expressionof Escherichia coli mal genes Chung, S. Y.;Choi, Y. L.
  16. The EMBO J. v.17 CRP interacts with promoter-bound RNA polymerase and blocks transcriptional activation of the dctA promoter Wang, Y. P.;Kolb, A.;Buck, M.;Wen, J.;O'Gara, F.;Buc H.
  17. Agric. Biol. Chem. v.53 Nucleotide sequence of the glycerol-3-P dehydrogenase gene of Escherichia coli and regulation by the cyclic AMP-CRP complex Choi, Y. L.;Kawase, S.;Kawamukai, M.;Utsumi, R.;Sakai, H.;Komano, T.
  18. Biochem. Biophysica Acta. v.088 Regulation of glpD and glpE gene expression by a cyclic AMP-CRP complex in Escherichia coli Choi, Y. L.;Kawase, S.;Kawamukai, M.;Sakai, H.;Kamano, T.
  19. Molecules & Cells. v.4 Mutational analysis of CRP binding site in the regulatory region glpD and glpE genes from E. coli Choi, Y. L.;Chung, S. Y.;Chung, C. H.
  20. J. Bacteriol. v.173 Nucleotide sequence and characterization of the sfs1 gene : sfs1 gene is involved in CRP dependent mal gene expression in Escherichia coli Kawamukai, M.;Utsumi, R.;Takeda, K.;Higashi, A.;Matsuda, H.;Choi, Y. L.;Komano, T.
  21. J. Bacteriol. v.171 Cloning and sequencing of an Escherichia coli gene, nlp, highly homologous to the ner genes of bacteriophages Mu and D108 Choi, Y. L.;Nishida, T.;Kawamukai, M.;Utsumi, R.;Sakai, H.;Komano, T.
  22. J. Gen. Microbiol. v.132 Rid out, C. J.;J. R. Coley-Smith;J. M. Lynch.
  23. Anal. Biochem. v.127 Serratia marcescens chitinase : one-stip purification and use for the determination of chitin Roberts, R. L.;Cabib, E.
  24. Eur. J. Biochem. v.252 no.2 Primary cause of mortality in the armywarm larvae simultaneously parasitized by parasitic wasp and infected with bacteria Matsumoto, H.;Noguchi, H.;Hayakawa, Y.
  25. FEMS Microbiol. Lett. v.60 no.1 Cloning of the 52-kDa chitinase gene from Serratia marcescens KCTC2172 and its proteolytic cleavage into an active 35-kDA enzyme Gal, S. W.;Choi, J. Y.;Kim, C. Y.;Cheong Y. H.;Choi, Y. J.;Lee, S. Y.; Bahk, J. D.;Cho, M. J.
  26. Experiments in Molecular Genetics Miller, J. H.
  27. Biochim. Biophys. Acta v.39 The caracterization of the pathway of maltose utilization by Esherichia coli. 1. purification and physical chemical properties of the enzyme amylomaltase Wiesmeyer, H.;Chon, M.
  28. Proc. Natl. Acad.Sci. v.51 The role of adenylic acid in the activation of phosphorylaes Helmreich, E.;Cori, C. F.
  29. Molecular Cloning A laboratory manual Sambrook, J.;Fritsch, E. F.;Maniatis, T.
  30. J. Bacteriol. v.164 Negative regulation of adenylate cyclase gene(cya) expression by cAMP-cAMP receptor protein in Escherichia coli Kawamukai, M.;Kishimoto, J.;Utsumi, R.;Himeno, M.;Komano, T.;Aiba, H.
  31. Nature. v.227 Cleavage of structural proteins during the assemblyof the head of bacteriophage T4 Laemmli, U. K.
  32. Proc. Natl. Acad. Sci. US7A v.76 Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets : procedure and some aplication Towbin, H.;Staehelin, T.;Gordon, J.