Isolation and Characterization of the Ribosomal Protein 46 Gene in Drosophila melanogaster

  • Published : 1998.03.01

Abstract

A cDNA clone coding for ribosomal protein 46 (rp46) which is a component of 60S ribosomal large subunit has been identified from Drosophila melanogaster. A cDNA clone encoding S. cerevisiae rp46 was used as a probe to screen a Drosophila larvae cDNA library. The DNA sequence analysis revealed that the cDNA coding for Drosophils rp46 contains a complete reading frame of 153 nucleotides coding for 51 amino acids. The deduced amino acid sequence showed 71-75% homology with those of other eukaryotic organisms. Northern blot analysis showed that about 1-kb rp46 transcripts are abundant throughout fly development. Whole mount embryonic mRNA in situ hybridization also showed no preferential distribution of the transcripts to any specific region. The chromosomal in situ hybridization revealed that the identified gene is localized at position 60C on the right arm of the second polytene chromosome with a possibility of single copy.

Keywords

References

  1. Biochemistry v.24 Translational regulation of mRNAs for ribosmal proteins during early Drosophila development Al AG;Fruscoloni P;Jacobs LM
  2. Mol. Cell. Biol. v.15 The genomic organization of the region containing the Drosophila melanogaster rpL7a (Surf-3) gene differs from those of the mammalian and avian sufeit loci Armes N;Fried M
  3. Yeast. v.8 Structural and putative regulatory ewquences of Kluyveromyces ribosomal protein genes Bergkamp-Steffens GK;hoekstra R;POlanta RJ
  4. Biochem. Biophys. Res. Commun. v.213 The primary structures of rat ribosomal proteins: the characterization of the cDNAs for S1 and L39, corrections in the sequences of L7 and L18a, and the idetification of L33 Chan YL;Olvera J;Wool IG
  5. Anal. Biochem. v.162 Single step method of RNA isolation by acid ruanidinium thiocyanate-phenol-chloro-form extraction Chomxzynski N;Sacchi N
  6. Molecular Cloning: a Laboratory Manual (2nd ed.) Screening by hybridization Ford N;Nolan C;Ferguson M;Sambrook J(eds.);Fritsch EF(eds.);Maniatis T(eds.)
  7. Mol. Cell. Biol. v.5 Selective translational regulation of ribosomal protein gene expression during early development of Drosophila melanogaster Kay MA;Jacobs-Lorena M
  8. Nature v.317 A Drosophila minute genen encodes a ribosomal protein Kongsuwan K;Yu Q;Vincent A;Frisardi MC;Rosbash M;Lengyel JA;Merriam J
  9. Nucleic. Acids. Res. v.13 The genes for yeast ribosomal proteins S24and L46 are adjacent and divergently transctly transcribed Leer RJ;van Raamsdonk-Duin MMC;Kraakman P;Mager WH;Planta RJ
  10. J. Biol. Chem. v.259 The primary structures of rat liver ribosomal protein L39 Lin A;McNally J;Wool IR
  11. Ann. Rev. Biochem. v.53 Regulation of the synthesis of ribosomes and ribosomal compoents Nomura M;Gourse R;Baughman G
  12. Nucleic. Acids. Res. v.12 Sequence, structure, and preferene of the Drosophila ribosomal pretein 49 gene O'Connell P;Rosbash M
  13. Biochim. Biophys. Acta v.1308 Molecular cloning of a cDNA encoding human ribosomal protein L39 Otsuka S;Tanaka M;Saito S;Yoshimoto K;Itakura M
  14. Cell. v.30 Expression of ribosomal-protein genes in Xenopus laevis development Pierandrei-Amaldi P;Campioni N;Beccari E;Bozzoni I;Amaldi F
  15. Nucleic Acids Res. v.16 Structural analysis of the Frosophila rpA1 Gene, a member of the eucaryotic 'A' type ribosomal protein family Qian S;Zhang JY;Kay MA;Jacobs-Lorena M
  16. Nucleic Acids Res. v.16 Isolation and structural analysis of a ribosomal protein gen ein D. melanogaster Rafti F;Gargiulo G;Manzi A;Malva C;Grossi G;Andone S;Graziani F
  17. Nucleic. Acids Res. v.17 Sequence of the ribosomal protein cDNA of D. melanogaster homologous to the L1 ribosomal protein gene of X. laevis Rafti F;Gargiulo G;Manzi A;Malva C;Graziani F
  18. Proc. Natl. Acad. Sci. USA v.74 DNA sequencing with chain-terminating infibitors Sanger F;Nicklen S;Coulson AR
  19. Nucleic Acids Res. v.15 cDNA and deduced amino acid swquence of Drosophila rp21C, antoher 'A'-type ribosomal protein Wigboldus JD
  20. Nature v.368 2.2 Mb of contiguous nucleotide sequene from chromosome Ⅲ of C. elegans Wilson R;Ainscougf R;abbreviated 51 authors;Wohldman P
  21. Ann. Rev. Biochem v.48 The structure and function of eukary otic ribosomes Wool IG