Structural and Functional Stability of the Genetic Recombinant Plasmid pCU103 in Different Water Environments

  • Published : 1996.09.01

Abstract

The stability of the genetically engineered microorganisms and their recombinant plasmids released in natural environments has been regarded as one of the molecular ecological topics. In this study, the recombinant plasmids pCU103 in which the pcbCD genes involved in biodegradation of biphenyl and 4-chlorobiphenyl were cloned in pBluescript SK(+) vector, were examined for their structural and functional stability in different waters at 15 $^{\circ}C$ by the methods of electrophoresis, Southern hybridization, quantification with fluorescent dye, and transformation. The recombinant plamids maintained their stabilities for about 30 days in sterilized distilled water (SDW), 15 days in autoclaved creek water (AW), 25 days in filtered and autoclaved non-sterile creek water (FAW), 4 days in Luria-Bertani (LB) broth, and less than one day in filtered non-sterile creek water (FW). The covalently closed circular (CCC) form of the plasmid was decreased and open circular (OC) form was increased as a function of incubation time, and then linear (L) form was produced to be ultimately degraded out. The degradation rates of the plasmid were proportionally correlated to trophic level of the water, and the biological factor such as DNases was found to be one of the most critical factors affecting structural and functional stability of the plasmid in non-sterile natural water.

Keywords

References

  1. Appl. Environ. Microbiol. v.55 Survival and detection of bacteria in an aquatic environment Amy, P. S.;H.D. Hiatt
  2. Sci. Tot. Environ. v.135 Identification and analysis of nucleic acids in natural freshwaters Beebee, T.J.C
  3. Gene transfers and environment Characterization of natural transformation of the soil bacteria Pseudomonas stutzeri and Acinetobacter calcoaceticus by chromosomal and plasmid DNA Bruns, S.;K. Reipschlager;M.G. Lorenz;W. Wackernagel;M.J. Gauthier(ed.)
  4. Arch. Microbiol. v.140 Natural transformation of Pseudomonas stutzeri by plasmids that contain cloned fragment of chromosomal deoxyribonucleic acid Carlson, C.A.;S.M. Steenbergen;J.L. Ingraham
  5. Appl. Environ. Microbiol. v.59 Natural transformation of Acinetobacter calcoaceticus by plasmid DNA adsorbed on sand and ground water aquifer material Chamier, B.;M.G. Lorenz;W. Wackernagel
  6. Appl. Environ. Microbiol. v.52 Simplified method for dissolved DNA determination in aquatic environments DeFlaun, M.F.;J.H. Paul;D. Davis
  7. Mar. Ecol. Prog. Ser. v.38 Distribution and molecular weight of dissolved DNA in subtropical estuarine and oceanic environments Deflaun, M.F.;J.H. Paul;W.H. Jeffrey
  8. Appl. Environ. Microbiol. v.56 Natural plasmid transformation in a high frequency of transformation marine Vibrio strain Frischer, M.E.;J.M. Thurmond;J.H. Paul
  9. FEMS Microbiol. Ecol. v.15 Transformation of Bacillus subtilis by DNA bound on clay in nonsterile soil Gallori, E.;M, Bazzicalupo;L. DalCanto;R. Fani;P. Nannipieri;C. Vettori;G. Stotzky
  10. Microb. Ecol. v.19 Natural transformation of a marine Vibrio species by plasmid DNA Jeffrey, W.H.;J.H. Paul;G.J. Stewart
  11. Kor. J. Microbiol. v.32 Cloning and expression of pcbCD gene in E. coli from Pseudomonas sp. DJ-12 Kim, C.K.;T.K. Sung;J.H. Nam;Y.C. Kim
  12. J. Bacteriol. v.176 Inducible cell lysis system for the study of natural transformation and environmental fate of DNA released by cell death Kloos, D.;M. Stratz;A. Guttler;R.J. Steffan;K.N. Timmis
  13. Biotechniques v.15 A rapid optimized protocol for downward alkaline southern blotting of DNA Koetsier, P.A.;;J. Schorr;W. Doerfler
  14. Kor. J. Microbiol. v.33 Effect of temperatue on persistemce of recombinant plasmid pCU103 in different waters Kwak, M.J.;C.K. Kim;Y.C. Kim;J.Y. Lim;Y. Kim;K.S. Lee;K.H. Min
  15. Arch. Microbiol.. v.157 Plasmid transformation of naturally competent A-cinetobacter calcoaceticus in nonsterile soil extract and groundwater Lorenz, M.G.;K. Reipschlager;W. Wackernagel
  16. Risk assessment for deliberate releases Impact of mineral surface on gene transfer by transformation in natural bacterial environments Lorenz, M.G.;W. Wackernagel;W. Klingmuller(ed.)
  17. Appl. Environ. Microbiol. v.57 High frequency of natural genetic transformation of Pseudomonss stutzeri in soil extract supplemented with a carbon/energy and phosphorus source Lorenz, M.G.;W. Wackernagel
  18. Microbiol. Res. v.58 Bacterial gene transfer by natural genetic transformation in the environment Lorenz, M.G.;W. Wackernagel
  19. Ann. Rev. Genet. v.25 Gene transfer between distantly related bacteria Mazodier, P.;J. Davis
  20. FEMA Microbiol. Lett. v.97 Adsorption of DNA on clay minerals: protection against DNase I and influence on gene transfer Paget, E.;L.J. Monrozier;P. Simonet
  21. Kor. J. Ecol. v.18 Molecular ecological stabilities of genetically modified 4CB-degrading bacteria and their gene DNAs in water environment Park, S.H.;M.J. Kwak;J.Y. Kim;S.G. Lee;C.K. Kim
  22. Appl. Environ. Microbiol. v.55 Production of extracellular nucleic acids by genetically altered bacteria inaquatic environment microcosms Paul, J.H.;A.W. David
  23. Appl. Environ. Microbiol. v.57 Gene transfer in marine water column and sediment microcosms by natural plasmid transformation Paul, J.H.;M.E. Frischer;J.M. Thurmond
  24. Appl. Environ. Microbiol. v.43 Fluorometric determination of DNA in aquatic microorganisms by use of Hoechst 33258 Paul, J.H.;B. Myers
  25. J. Water Pollut. Control Fed. Res. v.61 Recombinant DNA in wastewater: pBR322 degradation kinetics Phillips, S.J.;D.S. Dalgarn;S.K. Young
  26. Appl. Environ. Microbiol. v.58 Persistence of free plasmid DNA in soil monitored by various methods, including a transformation assay Romanowski, G.;M.G. Lorenz;G. Sayler;W. Wackernagel
  27. Mol. Ecol. v.2 Plasmid DNA in a groundwater aquifer microcosm-adsorption, DNase resistance and natural genetic transformation of Bacillus subtilis Romanowski, G.;M.G. Lorenz;W. Wackernagel
  28. Molecular cloning, A laboratory manual Sambrook, J.;E.F. Fritsch;T. Maniatis
  29. Appl. Environ. Microbiol. v.56 Detection of horizontal gene transfer by natural transformation in native and introduced species of bacteria in marine and synthetic sediments Stewart, G.J.;C.D. Sinigalliano
  30. Appl. Environ. Microbiol. v.58 Release of bacterial DNA by marine manoflagellates, an intermediated step in phosphorus regeneration Turk, V.;A.S. Rehnstam;E. Jundberg;A. Hagstrom