Proceedings of the Korean Society for Bioinformatics Conference (한국생물정보학회:학술대회논문집)
- 2004.11a
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- Pages.138-149
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- 2004
Correlation between Expression Level of Gene and Codon Usage
- Hwang, Da-Jung (Department of Computer Science and Engineering, Pohang University of Science and Technology) ;
- Han, Joon-Hee (Department of Computer Science and Engineering, Pohang University of Science and Technology) ;
- Raghava, G P S (Department of Computer Science and Engineering, Pohang University of Science and Technology, Bioinformatics Centre, Institute of Microbial Technology)
- Published : 2004.11.04
Abstract
In this study, we analyzed the gene expression data of Saccharomyces cerevisiae obtained from Holstege et al. 1998 to understand the relationship between expression level and nucleotide sequence of a gene. First, the correlation between gene expression and percent composition of each type of nucleotide was computed. It was observed that nucleotide 'G' and 'C' show positive correlation (r
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